Pseudoalteromonas sp. NC201: PNC201_05870
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Entry
PNC201_05870 CDS
T05464
Symbol
lcfB
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psen
Pseudoalteromonas sp. NC201
Pathway
psen00061
Fatty acid biosynthesis
psen00071
Fatty acid degradation
psen01100
Metabolic pathways
psen01212
Fatty acid metabolism
psen02024
Quorum sensing
psen04146
Peroxisome
Module
psen_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psen00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PNC201_05870 (lcfB)
00071 Fatty acid degradation
PNC201_05870 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PNC201_05870 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PNC201_05870 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psen01004
]
PNC201_05870 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psen04147
]
PNC201_05870 (lcfB)
Enzymes [BR:
psen01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PNC201_05870 (lcfB)
Lipid biosynthesis proteins [BR:
psen01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PNC201_05870 (lcfB)
Exosome [BR:
psen04147
]
Exosomal proteins
Exosomal proteins of breast milk
PNC201_05870 (lcfB)
Exosomal proteins of breast cancer cells
PNC201_05870 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-dom_DIP2-like
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AUJ69486
UniProt:
A0A2K9JW00
LinkDB
All DBs
Position
1447133..1448641
Genome browser
AA seq
502 aa
AA seq
DB search
MTKSIYELFEENVKQTPKKAAVVYLDQQVSYEELNRQVLKLSAHFVRSGLTPGQRVGVFA
PNGIEFVVTLLAIAKLGIAAVPLPISLKGNALITALKKTPVAMVVAWPTISKILLDANLI
EPSNLVTLGKAVSEELSWEAVQSCEKLDDLQHGVDLDAPFILTMTSGSTGQPKPIVLSQA
CKINRAMDATIQYYGLTKQDVILVATPMYHSLAQRGVLMPLMLGATTVVMPKFNLSQWLS
AIEQYKVSFLFAVAAQLESLIAKGTSGADLSSLKCIVSSSAVLEDTTKKRLLGMLSCRFH
ECYGASEVGVVTDFAVSENPEQSGSVGKALPFVSLKITDDQGCEVAAGQVGEICCNTSTI
FGGYLKMPDQTRAAFYVGDFFKTGDLGYVDEHGYLYYVGRKKEVISSGGINVFPQDIETV
VKSIEGVEDCVAFGIKDALLGEIVKVVIEQNQDTDLIPVIRKACLQELTDYQQPRFIERV
EALPRNQMGKVLRNDVKTQFSQ
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagtatttacgagttattcgaagaaaatgttaaacagactcccaagaaagca
gcggttgtctatctagatcagcaagtgagctatgaggagctgaatcgacaggtattaaag
ttaagtgcacactttgtacggtcgggtcttacccccggtcaacgagtgggtgtatttgcg
cctaatggcatcgaatttgtcgtaacactactcgctattgctaagctgggaatcgcagct
gtaccattaccaattagcctcaaaggtaatgcattaataacagcgctgaagaaaacgccg
gttgccatggttgtggcatggccgacgataagtaaaatattactcgatgccaatttgata
gagcctagtaacttggtaactcttggtaaagccgtgagtgaagagttaagttgggaagcg
gttcaatcttgtgaaaaattagatgacttgcaacatggtgttgatcttgatgcgccgttt
attttgacgatgacctcaggctccactgggcagccgaaaccaattgtgttaagccaagca
tgtaaaataaaccgcgctatggatgcaactatccaatattacggtttgaccaaacaagat
gtgatcctagtagcaacgccaatgtatcattctttagcacaaagaggggtgctaatgccg
ttaatgcttggcgctacaaccgttgttatgcccaagtttaatctttcacaatggctaagt
gcgattgagcagtataaggtcagttttttgtttgccgtagctgctcaactagaaagtttg
attgcaaaaggtacatctggtgcagatttaagttctttgaaatgtatcgtttcatcatct
gctgtgcttgaggatacgaccaaaaagcgtttattaggtatgctaagctgtcgctttcat
gagtgctacggcgcttcagaagtgggtgtggtcactgattttgcggtttcagaaaatcct
gagcaaagtggtagtgttggcaaagcactgccatttgtctcattgaaaattacggatgat
caagggtgtgaagtcgcagctggtcaagtaggagaaatatgctgtaacacttctaccatt
tttggtggctacctaaaaatgccagatcaaactcgggcggctttttatgtgggagatttc
tttaaaaccggagacttaggttatgtggatgagcacggatacctctactacgttggccgt
aaaaaagaggtgatttctagcggtgggataaatgtattccctcaagatatagagacagtt
gtcaaatcaatagaaggcgtagaagattgcgttgcgtttgggataaaagacgcgctattg
ggcgaaattgtaaaagtggtcatagagcaaaaccaagacaccgacttaattcctgtaatt
agaaaagcgtgcttgcaagagctaactgactatcaacagcctagatttatagaaagagtg
gaagctttaccgagaaaccagatgggaaaagtgcttcgtaacgacgttaagacacaattt
agtcaatag
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