Pseudoalteromonas sp. NC201: PNC201_06005
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Entry
PNC201_06005 CDS
T05464
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
psen
Pseudoalteromonas sp. NC201
Pathway
psen02020
Two-component system
psen02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psen00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PNC201_06005 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PNC201_06005 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psen03021
]
PNC201_06005 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psen02035
]
PNC201_06005 (fliA)
Transcription machinery [BR:
psen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PNC201_06005 (fliA)
Bacterial motility proteins [BR:
psen02035
]
Flagellar system
Flagellar assembly proteins
Stator
PNC201_06005 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
HTH_23
UPF0122
UTP15_C
Motif
Other DBs
NCBI-ProteinID:
AUJ69513
LinkDB
All DBs
Position
1476494..1477228
Genome browser
AA seq
244 aa
AA seq
DB search
MASPVNRAAGYQTSDHIHKVVERHAPLVKKVACHLIARLPASVQLDDLIQSGMIGLIEAS
KNFDATKGASFETFAGIRIRGAMLDEIRRGDWAPRSVHKNSRMVAEAISELESLLGREPK
DTEIAEKLDISLDEYHHILHDVNASKVIGIEDLGVDEDVITPANSDFALDKPFNNVKNER
FNESLVNAIKALPERDALVLSLYYNDEMNLKEIGAILDVSESRVSQIHGQAMIKLKAKIN
DWIN
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccggtcaacagagctgcgggatatcaaacttctgaccatatccataaagtg
gtcgagaggcatgctccacttgtcaaaaaagtggcatgtcacctgatcgctcggcttccg
gcaagtgtgcagctcgacgatctaattcaatcaggtatgattggattgattgaagcatct
aaaaatttcgatgctactaaaggcgctagtttcgagacctttgcggggatacgcatccga
ggtgcaatgctagatgaaatccgtcgcggagattgggcccctcggtccgtacataaaaac
agcagaatggtagccgaagctatatctgagctcgaatctctccttggccgcgaaccaaaa
gacactgaaatcgctgaaaaacttgatatatctttagatgagtaccatcatattttacat
gatgtaaatgcaagtaaagtcatcggcattgaggatctaggggttgatgaagatgtgata
accccagcaaacagcgattttgcgctagacaaaccgtttaataacgttaaaaatgaacgt
tttaacgagtctttagtaaatgctatcaaagcactacccgaaagggatgctctggtgttg
tcactttactataacgacgaaatgaatttaaaagagattggtgccatccttgatgtcagt
gaatctcgagtaagccaaattcacggtcaggcaatgataaagctcaaagctaaaatcaat
gactggataaattag
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