Pseudoalteromonas sp. NC201: PNC201_07945
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Entry
PNC201_07945 CDS
T05464
Symbol
msbA1
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
psen
Pseudoalteromonas sp. NC201
Pathway
psen02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psen00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PNC201_07945 (msbA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psen02000
]
PNC201_07945 (msbA1)
Enzymes [BR:
psen01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PNC201_07945 (msbA1)
Transporters [BR:
psen02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PNC201_07945 (msbA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
ABC_ATPase
AAA_22
AAA_24
MMR_HSR1
AAA_29
AAA_16
nSTAND3
APS_kinase
AAA_18
DUF4271
TMCCDC2
DUF2207_C
Motif
Other DBs
NCBI-ProteinID:
AUJ69883
UniProt:
A0A2K9JXT6
LinkDB
All DBs
Position
1906760..1908499
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AA seq
579 aa
AA seq
DB search
MQPTDKQIYARLFSYVKDFKLAAIFSVIGMIGYAAMDASFVALMDPFIDEGLTAGNRDVL
KLAPFVVIALVIGRGIFNYMASYCLSYVGSQVVRALRQQLFEHMLYLPVSFHDQHSNGEL
ISKITFDTEQVQQAVTKALQVLIREGAFVFFLLITMFYASWQLSLIFLVVVPIVAVIVTV
VSKRFKKISKNIQDAMGEVTKSSEQMMAGHKVIHGFGGQEKTISHFAKVNNHNRQQRVKM
DATKALSVSIIQIIAASAMAVILAIVAMPTMVDKISSGTFVTLITSMMMMLRPLKQLANV
NSDLQRGISAAKSVFAVIDLEQEKDTGTQSLSRAQGNLQVKDLTFTYPSKNDPVIESLNL
EIKAGQSIALVGRSGSGKSTISNLLPRYYDIEVGSIELDGTNINDYQLADLRAQFSIVSQ
QVVLFNDTIANNIMYSLKQPLSQEALEKVVKQAHVWEFVKDLPEGLNTVVGENGVMLSGG
QRQRIAIARAIVKDAPILILDEATSALDTESERLIQQALEELMADKTTIVIAHRLSTIER
CDCIYVLDKGKIIEQGMHAELVAQEGVYHALCKMQFGEQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccaaccgacaagcagatttacgctagattatttagctatgtaaaagactttaaa
ctcgctgccatattttcagtaattggcatgatagggtacgctgcgatggacgcttcgttc
gttgccttaatggatccgtttatcgatgagggtctcactgcaggcaatcgcgatgtacta
aaattggctccctttgttgtcatcgcgttagttattggacgcggcatctttaattatatg
gcatcgtattgcttgtcttatgtcgggtcgcaggttgtgcgtgctttgcgacagcaacta
tttgaacacatgttgtatctaccagtgtcgtttcatgatcaacattctaatggtgaattg
atatcaaaaatcacttttgatacggagcaggtacagcaagccgtcactaaggcacttcaa
gtgctgatccgtgaaggcgcatttgtttttttcttacttatcacgatgttttatgcaagt
tggcagctatcgctcattttcttagttgtggtaccgatcgtggcggtgatcgttactgtg
gtgtctaagcgcttcaagaaaatctccaagaatattcaagatgcgatgggagaagtgacg
aaaagctctgagcaaatgatggcgggtcataaagtcattcatggctttggtggccaagaa
aaaaccatctctcactttgctaaagttaataatcataaccgtcagcaacgcgtaaaaatg
gatgcgactaaagcgctgagcgtatctatcatccaaatcatagcagcgagcgcaatggcg
gtgatactcgcgattgtcgcgatgcctactatggtagacaaaatttcatcgggcactttt
gtcactttgatcacctctatgatgatgatgctgcgtcctttaaaacaacttgccaatgtg
aatagcgacctgcaacgcgggatctctgcggcgaaaagtgtgtttgcggtgattgatctt
gaacaagaaaaggacactggcactcagtctttatctcgtgctcaaggtaacctacaagtc
aaagacttaacctttacttatccatctaaaaacgatccggtgattgagtcattaaacctt
gaaatcaaagctgggcagagtattgcgttggtaggtagaagtggctcaggcaagtcaact
atctctaatctattaccacgttactatgatattgaagtgggcagtattgagttagatggc
acgaacataaatgattaccagcttgcggatctacgcgcgcagttttccatcgtgtcgcag
caagtggtgttgtttaatgacaccattgcaaacaatattatgtactcgttaaagcaaccc
ttatcgcaagaagccctagaaaaagtagtaaaacaagcccacgtctgggaatttgttaaa
gatcttcctgagggtctaaataccgttgttggtgaaaatggcgtgatgctttctggcgga
caacgacaacgtatcgctatcgcgcgtgctattgtgaaagatgcacctatccttatttta
gatgaagcaacatcagcattagacacagaatctgagcgtttgatccaacaagcgttagaa
gagctgatggccgacaaaacaaccatagtaattgcccatcggttatcgacaatcgagcgt
tgcgactgcatctatgtgctagataaaggcaagatcatcgaacaaggcatgcatgctgaa
ttggtcgcgcaggaaggggtttatcatgcactttgcaaaatgcagtttggtgagcaataa
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