Pseudoalteromonas sp. NC201: PNC201_09050
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Entry
PNC201_09050 CDS
T05464
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
psen
Pseudoalteromonas sp. NC201
Brite
KEGG Orthology (KO) [BR:
psen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psen03032
]
PNC201_09050 (ihfB)
03036 Chromosome and associated proteins [BR:
psen03036
]
PNC201_09050 (ihfB)
03400 DNA repair and recombination proteins [BR:
psen03400
]
PNC201_09050 (ihfB)
DNA replication proteins [BR:
psen03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PNC201_09050 (ihfB)
Chromosome and associated proteins [BR:
psen03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PNC201_09050 (ihfB)
DNA repair and recombination proteins [BR:
psen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PNC201_09050 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AUJ70103
LinkDB
All DBs
Position
complement(2160860..2161150)
Genome browser
AA seq
96 aa
AA seq
DB search
MTKSELIEQLALQHAHVPVKDVENAVKEILEQMAGSLSDSERIEIRGFGSFSLHFRSPRT
GRNPKTGETVELDGKYVPHFKPGKELRDRVNESLNN
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtctgaattgatagaacaacttgcactgcagcacgctcacgttcctgttaaa
gatgtagagaatgcggtaaaagaaatccttgaacaaatggctggctcattatcagactcg
gaacgtatcgaaatccgtggctttggtagtttctcgcttcacttccgttcccctcgcact
ggtcgtaatcctaaaacgggcgagacagtagaattggatggtaaatacgtaccacacttt
aagccaggcaaagagctgcgcgatagagtaaacgaaagcttaaataattaa
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