Pseudoalteromonas sp. NC201: PNC201_19255
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Entry
PNC201_19255 CDS
T05464
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psen
Pseudoalteromonas sp. NC201
Brite
KEGG Orthology (KO) [BR:
psen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psen03016
]
PNC201_19255 (rnd)
Enzymes [BR:
psen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PNC201_19255 (rnd)
Transfer RNA biogenesis [BR:
psen03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PNC201_19255 (rnd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
AUJ72068
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All DBs
Position
pNC201:complement(322283..323413)
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AA seq
376 aa
AA seq
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MQYQVIESQTALDEFVLSISKAKVLAVDTEFMRRRTLYPEIALLQIFDGNHLALIDPLAD
MDFSRLWTLFSDTSVLKVLHSPSEDIEVFLKFAGFIPSPIFDTQFALQLLGEGSCIGFAN
MVKQLRDVDIDKSESRTDWLRRPLTQSQLDYAASDVYHLLPCFETIQARVNEKQLFNIVL
QESELLAQKRSFRQPDEVLYLDVKNVWQLKPRDLATLKELAAWRRAKAEKKNLALNFVLK
EHNMVEIAKRRPSSLGSLRNVPGVEPMEVNRSGKEILACIEKAKEVSEQDCPQRVRRLID
FKGYKAACKDIKQVIAEVAKTNDIPVDVFASKKQINQVISWSWKKSPEEKQLLMKPDLAL
GWRAELVADKLDSWWL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtatcaagttattgaaagccaaacagcactagatgaatttgtcttgtctatttcg
aaagccaaagtgctcgccgtcgacaccgagttcatgcgtcgccgcaccctatacccagaa
attgctctgttacagatctttgatggtaaccaccttgcccttatcgatccactagccgat
atggattttagtaggctgtggacgttgttttcagatactagtgttttaaaagtacttcat
tctccgtcagaagatatcgaagtatttctaaagtttgcaggttttatcccatcaccaatt
ttcgatacccagtttgctttacagttgttaggtgaggggagttgtattggttttgctaat
atggtgaagcaacttagagacgtagacattgacaaaagtgaatccagaacagattggtta
cgccgccctttaactcaaagccaattagattacgccgcctccgatgtatatcatttactg
ccatgttttgagactattcaagcgcgagtaaatgaaaagcagctatttaacatagtgctt
caagagagtgagttgcttgcccaaaagaggagcttccgtcaacctgatgaagtactttat
cttgatgtcaaaaacgtgtggcaacttaagcctagagatcttgctactctaaaagaactt
gcagcgtggcgcagagctaaggcagagaaaaagaacttagcgctaaatttcgtgcttaaa
gaacataacatggtcgaaattgctaaacgtcgtccaagctcactgggaagtttacgtaat
gttccaggtgttgagccaatggaagttaatcgctctggcaaagaaattctcgcctgtata
gaaaaagcaaaagaagtaagtgaacaagattgtccacaacgcgtgagaagacttatcgac
ttcaaaggttacaaagcagcgtgcaaggatatcaaacaggttatcgccgaagtcgccaaa
actaacgatattcctgttgatgtgtttgcttcgaaaaaacaaatcaatcaggtgatcagc
tggtcgtggaaaaagtcaccggaagaaaagcaattgctgatgaaacccgatcttgcgtta
ggctggagggctgagcttgttgcagataagttagacagttggtggctgtag
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