Pseudoalteromonas sp. NC201: PNC201_19750
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Entry
PNC201_19750 CDS
T05464
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psen
Pseudoalteromonas sp. NC201
Brite
KEGG Orthology (KO) [BR:
psen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psen03032
]
PNC201_19750
03400 DNA repair and recombination proteins [BR:
psen03400
]
PNC201_19750
Enzymes [BR:
psen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PNC201_19750
DNA replication proteins [BR:
psen03032
]
Prokaryotic type
DNA Topoisomerases
PNC201_19750
DNA repair and recombination proteins [BR:
psen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PNC201_19750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AUJ72167
UniProt:
A0A2K9K3C2
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All DBs
Position
pNC201:complement(452730..453809)
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AA seq
359 aa
AA seq
DB search
MQRFATGDNVDCKDIRSEFHECNRLEVARKKWGRGFCYLDTGNNPIRSKVIKKRIKQLVI
PPMWKQVQISACAFDKVQAVGFDSKGKKQYIYHPSYQLTQQQAKFTRMAQFAKQLPQART
RCIEQLEHDDWNQEKVAALAVMVLDSTGIRIGNQHYYQHNDTCGLTTLRRKHLKHNEVGI
TFEFQGKHGKQRKVDVFDEQLCQFISESAVQTGYGLFRYHYQGRWHDLTSDDVNTQIHAL
HGPQFTSKDYRTWVASRLAVQFAFDVATEVESNHKKRFDTHLIKRVAKALGNTPKVCRDY
YIHPKLLSHLCELSQNQTVPDFSNDFWQLDGSLSDCEAFIVKVLTEEKGEEGTPPPLGT
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgttttgccactggagataatgtggactgcaaggatattcgatcagagtttcac
gaatgtaatcgtttagaggttgccagaaaaaagtggggccgtggtttttgctatttagat
acgggcaacaaccccattcgctctaaggttatcaaaaagcgaataaagcagttggtgatc
ccgccgatgtggaagcaggttcaaatcagcgcttgcgcttttgataaagtgcaagccgtt
ggtttcgatagcaaaggcaaaaagcaatatatctatcatccaagttatcagctcacccag
caacaagctaaatttacccgtatggctcaatttgcaaaacagctaccacaagcaagaacg
cgctgtatagagcaattagaacacgatgattggaaccaagaaaaagttgctgcactcgct
gttatggtgcttgattccacagggatccgtattggtaaccaacattactatcaacacaat
gatacttgtggtctaaccacgttaaggcgcaagcacctgaaacataacgaagtagggata
acttttgagtttcagggaaaacatggtaaacaaagaaaagttgacgtattcgacgaacaa
ctttgtcagtttattagtgaatccgccgtacaaactggctacgggttatttcgatatcat
taccaagggcgatggcacgatttaaccagcgatgacgtcaacacgcagatccacgcgcta
cacggcccacaatttactagtaaggattaccgcacttgggtagcttctcggctagcggta
cagttcgcatttgacgttgcaacggaagtcgaaagtaatcataaaaagcgttttgatacc
catttaatcaaacgagtagcaaaggcacttggcaacactcccaaggtctgtcgagactac
tatatccaccctaagctcttaagccatttatgtgaactcagccaaaatcaaacggttcct
gattttagtaacgacttttggcagttagatggctcgctcagcgattgtgaagctttcatc
gtgaaggtattaacagaagaaaagggggaggaaggaacgcctccccctttgggcacttag
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