Pseudoalteromonas sp. NC201: PNC201_19945
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Entry
PNC201_19945 CDS
T05464
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psen
Pseudoalteromonas sp. NC201
Brite
KEGG Orthology (KO) [BR:
psen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psen03400
]
PNC201_19945 (sbcD)
DNA repair and recombination proteins [BR:
psen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PNC201_19945 (sbcD)
Archaeal homologous recombinant proteins
PNC201_19945 (sbcD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
AUJ72206
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All DBs
Position
pNC201:490410..491609
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AA seq
399 aa
AA seq
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MKVLHTSDWHLGQSFYEHDRSEEHQLFLDWLCDALVEQQIDVLLISGDIFHTATPPASAE
KQLYTFIQKASQLCPQLHIILIAGNHDSANRIETAKPLLTLFNTHVIGRFNKQAPEQVVI
DLPIAAQHMHVVAMPFLRSADLPKPLDDEFDYQTGVQLAYQQALSTIEEVKGPIVLMGHL
HAKGGTISEDSERNLNIGGFDAVSAGVFGEQFDYVALGHLHKAQTVAKQSAIRYCGTPLP
MSFSERNYKHQVLLAEFNEQGLVDVNPLYVPRFKDVLYIPEDGAKRLAELCEAIAAQDFS
KFDSAPYVRLKLSAAETNSRFRAEIDEALKGKDIKFCGIERVSKGAAASEWLFEDLGKVE
SLSPNTLLDIAYREIEPEQEKAPATLHEKLAEVIASMEE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttacacacgtctgactggcacttagggcaatcgttttacgagcatgatcgc
agtgaagagcatcagctgtttttagactggctatgcgatgcgctggttgaacagcaaatt
gatgtactgttgatcagcggtgatatttttcataccgcaacaccgcccgcgagtgctgaa
aagcaactgtatacctttatccaaaaagcatctcaactgtgtcctcagctgcacattatt
ctgattgcaggcaaccacgattccgctaatcgcattgaaaccgcaaaaccactcttaacc
ttattcaacacccatgttattggacgctttaacaagcaagcgcctgaacaagttgttatc
gatttacccatcgccgcgcagcatatgcatgttgtggcaatgccatttttgcgcagtgct
gatttaccaaaaccgctagatgacgagtttgactatcaaaccggggtacaattagcttat
cagcaagcgctaagcacgatagaagaagtgaaaggtcctattgtgctaatggggcatctg
cacgccaagggtggaacgatttctgaagattctgagcgtaacctcaacattggcggcttt
gatgcggtgtctgccggcgtgtttggcgagcagtttgactatgttgcgctaggccattta
cataaagcgcaaaccgtcgctaagcaaagtgctatcagatactgcggcacacctttgcca
atgtcattttccgaacgcaattataagcatcaagtattgctcgctgaatttaatgagcaa
ggtctggtcgatgtaaaccccctttacgttccccgttttaaagatgtgttatatatccct
gaagatggtgcaaagcgcttggctgaattatgcgaagctatcgcggcgcaggattttagc
aagttcgatagcgctccctatgttcgcttaaaattatctgcagctgaaaccaatagccgc
tttcgagccgagattgatgaagcgctaaaagggaaggatattaagttttgtggtattgag
cgggtgtctaaaggcgcagccgccagtgagtggttgtttgaagatttgggcaaagttgaa
tcgttatcgcccaataccttgttggatattgcctatcgcgaaattgaacctgagcaggaa
aaagcacccgcgacattacatgaaaagttagcagaagtgatcgcgagcatggaggagtag
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