Pseudoalteromonas sp. NC201: PNC201_19950
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Entry
PNC201_19950 CDS
T05464
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psen
Pseudoalteromonas sp. NC201
Brite
KEGG Orthology (KO) [BR:
psen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psen03400
]
PNC201_19950 (sbcC)
DNA repair and recombination proteins [BR:
psen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PNC201_19950 (sbcC)
Archaeal homologous recombinant proteins
PNC201_19950 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
TMF_DNA_bd
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AUJ72207
UniProt:
A0A2K9K3G4
LinkDB
All DBs
Position
pNC201:491614..495273
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AA seq
1219 aa
AA seq
DB search
MKLEKILITNLASIESAEVDFTAAPLKDTGLYAITGDTGAGKSTLLDAVCLAFYGKTARL
KSDDKEKVAFNGDNIKLNDPRNLLRRGCVAASASVVFIAQDSKRYQAIWSVERARKSPKG
NLKTATIELFSLPDMTLVCEKKKETEQKIEQLVGLNFEQFTRAVLLAQHEFSAFLKAGGD
ERAQLLECLTGTEKFSNIGKAVFEAHKQKKTELQSQQDRLGQIVLLSPEQHAELEAQKLG
LLDTRNRQQETSTKLQAQLQWLADVELRKQKIAEVEHSLQTLEQQIEEGKPQQEYAQQVL
KANEMRDNREQHELADKRVAQLSQERLALQQQDFASAITTLKAKQQQLEQQLITQQANFV
KLEPSFNSIRILDEKLSLHKAQELETKPYLDKHANLIAQHEAAMQKYQVQQGEIDTELQQ
LEHEQANLHSVSNIAGQWNVVQPQFDDLQKYQQQRNDYEVQLQKLPNEQQALGTQLSKHE
AEVQHLQKVYDTEASALSALKEALAPLTQQDLNLALQNWSLCVQAYRSIEEGDALLHQLR
SQQTQHHIGLERLEILIRDTKQQDELSKQRLALTRDNLEQVQLRASERISDLRAQLRAGQ
ECMVCGSKEHPYGVEHIDAHWEQLLSDFRSQYQAAEQAREQVLQRYNQQVGEKERENALW
QSVTQEIAHCTKQINENRARLDALSDEYKVGSAEQAELQLVSIQSRLNELSKLRNNIDRQ
WQLVQQAQQHLEQAKHKGQALQQQHHDLGNHIAFLRTEYDQLSQTVAALRNRLEALISDK
SWWQDFDSSPQAAIRQLKTGVQTWLKTTERTDALTAEKVQLEHQLHLVSQQKQDEAQRLE
ELEHTLLQHQQNIERLNRERAEYLPQQHTRLDDWIAELKLQEQQSREQITQTQLALSQTE
AQREKTQHSLTQLEKQIAEQTSRLQQLDARFEQWLLDQQGQLDKVKVLALLEVSLDEARA
NLEKCAQVQQAFQNTKLQLSHQREELSQLESKYPDGVDSEQVKQSHAETTQALEQTQNQL
LQVQSALEVDAQNKQQFSLQAANLAQLQQDYEQWHLLDKLLGDATGKKLRNWAQTQTLKI
LLQYANQQLHTLSRRYLLTNIEQSLEIAVIDKDMADEQRSVNTLSGGESFLVSLSLALGL
AALSSNKVQIHSLFIDEGFGTLDPETLGVAIDALDALQSQGRKVGVISHVAQMSERIATR
IHVNKQPGGYSSLNLVPQT
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgaaaaaatattaatcaccaaccttgcctctatagaaagtgcagaagtcgac
tttactgcggcaccactcaaagacaccggtctttatgccattaccggtgatacaggggcg
ggaaaaagcactttactggatgcggtttgccttgcattttatggcaaaaccgcacggtta
aaatcggacgacaaagagaaagttgcctttaatggcgataacattaagttaaacgacccg
cgaaacctattgcgtcggggctgtgttgcggcatctgctagcgtggtttttattgctcaa
gatagcaaacgttatcaagctatttggtcggtagagcgcgctagaaaaagccctaaaggt
aatttaaaaactgccactattgagttgtttagcctaccagatatgaccctagtctgtgag
aagaaaaaagaaacagaacaaaaaatcgaacagctagtcgggcttaactttgaacagttt
actcgagctgtgttgcttgctcagcatgaattctccgcgtttttgaaggcagggggagat
gaacgggctcagttactagaatgtcttacgggtaccgaaaagttcagcaatatcggtaaa
gcggtttttgaagcgcacaagcaaaagaaaactgagctgcaatctcagcaagataggcta
ggtcaaattgtgctcttgtcaccagagcagcatgccgaacttgaagcacagaagttggga
ttgcttgatacaagaaatcgacaacaagaaacaagtacaaagctgcaagctcagctgcaa
tggctcgcggatgtcgagctaagaaagcaaaaaatagctgaggtggaacactcgctacaa
acgcttgagcagcaaatagaagagggaaagccacagcaggaatatgcgcagcaagtctta
aaagccaatgagatgcgtgataaccgtgagcagcatgagctggcggataaacgcgttgcg
cagctatctcaagagcggctagcactgcagcaacaagattttgcatccgccattacaacg
ctcaaagcaaaacagcagcaactggaacagcagcttattacgcagcaagccaattttgta
aagttagaaccaagctttaacagcattcgtatattggatgaaaagctgagcctacataaa
gcgcaagaactagaaactaagccctatctagataaacacgccaatcttattgcgcaacat
gaggctgcaatgcagaagtatcaagtgcaacaaggcgaaatcgatactgaattacagcag
ttagagcatgagcaagcgaatttgcactcagttagcaatattgccgggcaatggaacgtg
gttcaacctcaattcgatgatctgcaaaagtaccaacaacaacgtaatgattatgaagtc
cagttgcaaaaattaccgaacgaacagcaagcgctaggtacacaattgagcaaacatgag
gctgaggtacagcacctacaaaaggtttacgacaccgaagccagcgcgctttccgcatta
aaagaagcactcgcacctttgactcaacaagacctaaatctggcattgcagaattggtct
ctatgcgtgcaggcttatcgtagtatcgaagaaggagatgccttgctgcatcagctacga
tcgcaacaaactcaacatcatattggcttggaaaggcttgagatactgatccgagatacc
aagcagcaagatgagttgtctaagcagcgcctagccctaactcgtgataacttggagcaa
gtgcagttacgcgcaagtgagcggatcagcgatttacgcgctcaattgcgagcagggcaa
gaatgcatggtatgtggctcaaaagaacatccttatggtgtagagcacatcgatgcccat
tgggagcagttactatcggattttcggtctcagtatcaagctgctgagcaagctcgtgag
caagtgttgcagcgttataatcaacaagtcggtgaaaaagagcgtgaaaatgcgctatgg
cagtcagtcactcaggaaattgctcactgcactaagcaaataaatgagaatcgcgctcga
ctagatgcgttgagtgatgagtataaagttggcagcgctgagcaagctgaattgcaactt
gtgagtattcagtcacggctaaatgaactatccaagttacgcaataatatcgaccgccag
tggcaattggttcagcaggcacaacaacacctcgagcaggctaaacataaagggcaggca
cttcagcagcagcaccatgatttaggtaatcatattgcctttttgcgaaccgaatatgat
cagctatcacaaacagtggctgccttacgcaatcggcttgaagcgttaatttccgataag
tcgtggtggcaagactttgattcatctcctcaagctgccattaggcaacttaaaacgggg
gtgcaaacttggttaaaaaccaccgagcgcaccgatgcgttaacggcggaaaaagttcag
cttgagcatcaattacatcttgtcagtcaacaaaaacaagatgaagcgcagcgacttgaa
gaattagaacatacgcttttacaacatcagcagaatattgaacgcctcaatcgcgaacgt
gctgaatacttaccacagcagcacaccagattggatgattggattgcagagcttaagctg
caagaacagcaaagccgagagcagatcacacaaacccagctagcgctgagccaaaccgaa
gcacagcgtgaaaagacccaacacagtctgacgcaactagaaaagcaaattgccgagcaa
acatcccggttgcagcaacttgatgcgcgttttgaacaatggttgctcgaccagcaaggg
cagctagacaaagtaaaagtattagcgttacttgaggtttctttggatgaagctcgagcg
aatttagaaaagtgtgcgcaagttcagcaagcctttcaaaacactaagctgcagcttagt
catcagcgtgaagaactcagccaacttgaaagtaagtaccctgatggggttgatagtgaa
caagttaagcaaagtcatgccgagacgacgcaagcacttgaacaaactcaaaatcagtta
ctacaagtgcaaagtgcattagaggttgatgctcagaataaacaacaattctctttgcaa
gccgcaaatctcgctcagttgcaacaagactacgagcagtggcatttgctagataagtta
ttaggcgacgcaacaggcaaaaagttgcgtaattgggcgcaaacgcaaacgctaaaaatc
ttattgcagtatgctaaccagcaattgcatacgctttctagacgttatctgcttaccaac
attgagcaatctttagaaattgcggtcatagataaagatatggctgacgagcaacgtagc
gtcaacaccttatctggaggagagtccttcttggtatctttatctttagcacttggactt
gctgcactttcatcaaataaagtgcaaatacattcattattcattgatgaagggtttggt
acgttagaccccgagacgctaggtgtcgcaattgatgcactagacgcgttgcaatcacaa
ggccgcaaggttggagtgatctcgcatgttgctcagatgagcgagcggatcgccacccgt
atccatgtgaataaacagccgggaggctactcatctttaaatttagtaccacaaacataa
DBGET
integrated database retrieval system
