KEGG   Pseudoalteromonas sp. NC201: PNC201_20225
Entry
PNC201_20225      CDS       T05464                                 
Symbol
ygcB
Name
(GenBank) CRISPR-associated endonuclease/helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
psen  Pseudoalteromonas sp. NC201
Brite
KEGG Orthology (KO) [BR:psen00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:psen02048]
    PNC201_20225 (ygcB)
Enzymes [BR:psen01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PNC201_20225 (ygcB)
Prokaryotic defense system [BR:psen02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    PNC201_20225 (ygcB)
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 DEAD Helicase_C ResIII Helicase_C_2
Other DBs
NCBI-ProteinID: AUJ72261
UniProt: A0A2K9K622
LinkDB
Position
pNC201:557231..560092
AA seq 953 aa
MTDLNSLMFKYWGKARKPLEIDYCMSEINGESLQDIVERHPGVNSVDHLKALASKKGWQI
ARQGETFHRYHLLVFHSLDVAAVALTYLDLNKQFTQDLAEFLGLTIPQLKSLVGFFVAIH
DLGKFASAFQNLAEFYDSNLSQGKSKEPYSAKDARHDGLGHHFWKMCLKQLKENNISAAL
HEALKKLGTVRIILNAVFGHHGDPVVAGEFGRKDKDYCIDENYCACIEFIQLSLEMFASN
FPVEKFADTLWRKHLRYASWHINGICILADWLGSDTEYFAYQSQSMAIDAYWQKALKKSH
NALLDRQLTGNVEVSPYDSVKKHFGFDTPTPLQAFAEQVPVGSSPQLFILEDVTGAGKTE
AALILIHRLMYAGAADGFYFGLPTMATSSAMYHRIAKHYLQMMSIDGKKASLVLAQGASM
MEEAYQDSLIYNQLPDIEYGNSDSTASQACHVWYADSKKKALLAKAGVGTIDQPLLSILP
SKHSALRVHGLVRKILVLDEVHAADQYMFTMLEDLLRVHLRFGGSVILLTATLPHERRNR
LCNIWQEELGLEHVENIQNSEFPLVTGIDQQGKLKEQPVGSLSRNQKSVRVDFIHSEQDC
IDEILKRAKRGEAVVWIRNTVTDAQNAYALLAEHYPQEHIILFHSRFALYDRKQKEKQVL
SKFGKESGPEQRAGKILVSTQVFQESIDADSDFMISDICPIDDLIQRAGRLKRHIRDANG
NYNDKLKEDERPPALLKVFCPEWQNEPETDWLHKGHSGTAAVYRSSAIIWLTQKVLREKG
GMYLPEKARDLVEGVYSQMALNTRPSNLDCHHSEYRAREQTMENTAKQLKLEWDKGYSRE
AGKVWLGEELEINTRYSDRVNIQVVMLKLTEGEELTFYADGLAKKHLLQHSEIRVDEESI
AKKLAPVPKEYSEQLESLFERYPSLKYKRFWLQGSDENYLYEDSKGLIQKESP
NT seq 2862 nt   +upstreamnt  +downstreamnt
atgacagatctaaacagtttgatgttcaaatactggggtaaagccagaaagccacttgaa
attgattactgcatgagtgagattaatggcgagtcattacaagatattgttgaacgccat
ccaggcgttaattctgtcgatcacctcaaagcacttgcgagcaaaaaagggtggcaaatc
gccaggcagggcgaaacttttcaccgttatcacctacttgtatttcatagcctagatgtg
gcggcggttgcactgacttatctggatttgaataagcaatttacacaagatttggccgag
tttctggggttaactattccacagcttaagtctttggtcggattctttgttgcgattcac
gacttgggtaaatttgcatccgcttttcaaaatctcgctgagttttatgacagcaatcta
agtcagggaaagtccaaagagccatattctgcaaaagatgcccgacatgatgggttaggc
catcatttctggaaaatgtgtctaaagcagcttaaagaaaataatatttcagctgcatta
catgaagctttgaagaagcttggaactgttaggatcatactaaatgctgtgtttggccat
catggtgatcctgttgtggccggagagtttggtagaaaagacaaggattattgtattgat
gaaaattattgtgcgtgtatagagtttatccagcttagtctagagatgtttgccagtaac
tttcctgttgaaaagtttgcggatacgttgtggcgaaaacaccttagatatgccagctgg
catatcaatggcatatgtattttggctgactggctggggtccgatacggaatattttgct
tatcagtcacaatctatggcaattgatgcttattggcagaaagctttaaaaaaatcacat
aatgctcttttagacaggcaactcacaggaaatgttgaagtttcgccttacgattctgtt
aaaaagcactttggcttcgatacaccaacgccactacaggcttttgctgagcaggtccct
gttggttcttcacctcaattatttattttggaagacgtgactggagcaggtaagacggag
gccgcactgatcctaatacatcgtttgatgtatgcaggtgctgctgatggattttatttt
ggcttacctaccatggccacatccagtgcaatgtatcatcgcattgcaaagcattatctt
cagatgatgtcgattgatggtaaaaaggcgagtttggttctggcacagggcgcaagtatg
atggaagaagcttatcaggattcgctcatatataatcagcttcctgatatcgagtatggt
aattccgactccacagcgagtcaggcctgtcatgtttggtatgctgactctaaaaagaaa
gcgctgcttgctaaggcgggcgttggcactatcgatcagccgttgctttccattttacct
tctaaacatagcgctcttcgggttcatggactggtgcgaaaaatattagtccttgatgag
gtacatgcggcagatcaatatatgtttacgatgctggaagatttattaagggttcattta
aggtttggtggcagtgtcatactactaacggcgacattaccccatgaaaggcgcaaccgg
ctttgcaatatttggcaagaagagctgggtcttgagcatgtagaaaacatccaaaattca
gagtttccgctggtaaccggaattgaccaacaaggcaaactgaaagagcaacctgttggt
agtctgtccagaaatcagaaatcagtacgggttgacttcattcactcagaacaggattgt
atcgacgagatactgaagcgagcaaagcgaggagaggcagttgtttggatccgtaatacc
gtaacggatgctcaaaacgcttatgctttactggcagagcattatccacaagagcatatc
attctgttccatagccgctttgccttatacgacagaaaacaaaaggaaaaacaggtatta
agtaagtttggcaaagagagtgggcctgaacaaagagctgggaagatacttgtttcaact
caggtatttcaggaatcgatcgacgcggatagcgactttatgatcagcgatatctgccct
attgatgacttaattcagagagctgggcggttaaaaaggcatatccgtgatgctaatggt
aactataacgataagctaaaagaagatgaacggcctcctgcattattaaaggtgttttgc
ccggagtggcaaaatgaacctgaaacagactggttacataaagggcattctggtacagct
gcagtttatcgaagttcagcaattatttggctaacgcaaaaagtattaagagaaaaaggg
ggtatgtacttgcctgagaaggcgcgagatttggttgagggggtttatagtcaaatggca
cttaatacacgcccaagtaacttagattgccaccatagcgaatatcgggcgcgggaacag
actatggaaaacaccgctaaacagctaaagctggaatgggacaaaggttacagccgtgaa
gcgggaaaagtgtggttaggtgaggagctggaaataaacacgcgttacagcgacagagtc
aatattcaggtagtgatgttaaagctgaccgaaggggaagagctaactttctatgctgat
ggtttggctaaaaagcatttgttacagcacagtgaaattcgggtagatgaggagtcaata
gctaagaagctagcgccagttccaaaagagtatagcgagcagctggagagtcttttcgag
cgctacccctcattgaaatacaaacggttctggttacaaggtagtgatgagaattatctc
tatgaagatagtaaaggtttgattcaaaaggaatccccgtga

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