Pseudoalteromonas sp. NC201: PNC201_20370
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Entry
PNC201_20370 CDS
T05464
Symbol
rpiR
Name
(GenBank) HTH-type transcriptional regulator RpiR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
psen
Pseudoalteromonas sp. NC201
Brite
KEGG Orthology (KO) [BR:
psen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psen03000
]
PNC201_20370 (rpiR)
Transcription factors [BR:
psen03000
]
Prokaryotic type
Helix-turn-helix
Other families
PNC201_20370 (rpiR)
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
MarR
HTH_AsnC-type
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AUJ72290
UniProt:
A0A2K9K8S9
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Position
pNC201:595398..596270
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AA seq
290 aa
AA seq
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MDIISKIKEGLGHFSPAEEKVARLILAELNFAASASISELAEKAQVSHASITRLARSLGC
INVRDLKFQLTQSAAIGERFTNPEPIEKEKISHVYTSIQEILTLNAGLIDEAVVEQASEV
ICATRHCLIFGVGGGSSLMAQECQNRLFRLDVLSNAHSDPMMMRMVAATVNKGDVVICLS
LSGVSPDVKAAALIAKEYGAEVIAICPVSDLADIADHHLAIKTQESDYIFKPSAARYAMM
AAVDILSSEVAIRNQKRSREKLRRLKTQLDQHRDKNSNMPPADKRFPLGD
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtggacattattagcaaaattaaggaaggtttggggcattttagcccagcggaagaaaaa
gtcgctcggcttattttggctgagcttaactttgccgcaagcgcatccattagtgagtta
gctgaaaaagcacaggtcagtcatgccagcatcacacggttagcgcgtagcttaggctgc
atcaatgtacgtgaccttaagtttcagctgacacaatcagccgcaattggtgagcgtttt
acaaatcctgagccaattgaaaaagaaaagatttctcatgtttatacctctattcaggag
atccttacgctcaatgcgggactcatcgatgaagcggttgtggagcaggcgagtgaagtg
atttgcgccacacgtcattgcttaatttttggggttggtggtggtagcagcctgatggca
caagaatgtcaaaatcgcttatttcgcttggacgtacttagtaatgctcactccgatcct
atgatgatgcgcatggttgccgcaaccgtgaataaaggggatgtggtgatttgtctctcg
cttagtggtgtttctcctgatgtgaaagcggcggcgcttatcgccaaagagtatggtgct
gaggttattgctatttgcccagtgagcgacttggcggacattgccgatcaccacttagcc
atcaaaactcaagaaagtgattacatctttaagcccagcgctgcacgctatgccatgatg
gcggcagtggatatcttgtcgagcgaagttgctatccgcaatcaaaagcgctcaagagaa
aagcttcgacggcttaaaacccagttagatcagcatcgagataaaaacagcaatatgcca
cctgccgataaacgctttccgctgggggattaa
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