Pseudoalteromonas sp. NC201: PNC201_21960
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Entry
PNC201_21960 CDS
T05464
Symbol
ydcR
Name
(GenBank) putative HTH-type transcriptional regulator YdcR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
psen
Pseudoalteromonas sp. NC201
Brite
KEGG Orthology (KO) [BR:
psen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psen03000
]
PNC201_21960 (ydcR)
Transcription factors [BR:
psen03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PNC201_21960 (ydcR)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
MarR_2
HTH_36
HTH_Crp_2
RP-C
HTH_11
HTH_IclR
L71
Motif
Other DBs
NCBI-ProteinID:
AUJ72608
LinkDB
All DBs
Position
pNC201:968344..969801
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AA seq
485 aa
AA seq
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MISISPKTQSQDAKHKRLADVLRSAITEGKLTPGDKLPSARKLAELHGMNRHTVMNALQN
LVAEGWLVVKERSGYRVNTELPIFSSQQIDTKVPATPQIVPQFAKILTPVSSTKRTAYRY
SFAGGLPDLHAFPYDEFKRFLVKACRKTNVSHFHYSDIAGCELLKSQIQAYLRRARGLVC
DDLLICNGSQEALSLVANAFINPGDGVAIEMLGYPPARHAFTNAGAEVFALAQDAEGIKV
EALARCLEQNKVKLLYLTPLHQYPTTVTLSVPRRMAIYQLCQQYGVFIIEDDYDHEFHYL
CPPLQPMAASDPSGIVIYISTFSKIMFAGARVGYMSARADVLAQLVARKQLLNHKNDALT
QLAVAYWMEEGGFERHLRRMTKAYQVRHHVMGQHLSELKAKLDIDFEVPQGGMAYWVNSK
RDVSRLSEKALEKGIYVQCEPEFTLDKASSLSHIRLGFAAQEIEQQQAGLSELFALIAEL
EKNHE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttgatttctattagcccaaaaacacagtctcaagatgctaaacataaacgcttagcagat
gttttacgcagtgccattactgaaggtaagctcacacccggtgacaaacttccttctgcc
cgaaagctggctgagttacatggtatgaatcggcacacggtgatgaatgcgctacaaaac
ttggtagctgaaggctggctggtggttaaagagcgcagcggctatcgagtcaatactgaa
ctacctattttcagtagccaacagatagacacaaaagtgcctgctacaccacaaatcgta
ccgcaatttgctaaaatactgaccccagtaagcagcactaagcgtacggcctaccgctat
agttttgcagggggcttaccggatcttcatgcttttccctatgatgagtttaagcggttt
ttggtaaaggcgtgccgcaaaaccaatgtcagtcattttcactattcagacattgcgggg
tgcgagttactgaaatcccaaattcaggcgtatttgcgcagagcgaggggactggtatgt
gatgatttactgatttgtaatggctcccaagaagcgctctcattggtggcaaatgcattt
attaatccaggtgatggtgttgccatcgaaatgcttggttatccgcctgcgcgacatgcc
tttaccaatgcaggcgctgaagtttttgcattagcacaagatgcagaaggcattaaagtg
gaggctttggcgcgctgccttgaacaaaacaaggtgaagctgttgtatttaactcctcta
catcaataccccacgacagtgactttatctgtaccgaggcgcatggcgatttatcagctg
tgccagcagtatggcgtgtttattattgaagacgattacgaccatgagtttcattatctc
tgcccgccgttacagccaatggcggcaagtgacccaagtggtattgtgatttatatttct
accttctcaaaaatcatgtttgccggtgctcgtgtgggttatatgagtgcgcgggccgat
gtgctcgcgcaattggtggcacgtaagcagctacttaatcacaaaaatgatgcccttacc
cagttggctgtggcttactggatggaagagggcgggtttgagcgccatttacgccgcatg
accaaagcctatcaagtacgccatcacgtgatggggcagcacctaagcgagcttaaagcc
aagttagatattgactttgaagtgccacaaggcggaatggcgtattgggtaaacagcaaa
cgcgacgtctcgagattatctgaaaaagcacttgaaaaagggatttacgtacaatgtgag
cctgaatttactctcgataaggctagtagtttaagtcatattcgcttaggctttgcggcg
caagaaatcgagcaacagcaagctgggctgagtgagttatttgctttgatcgcagagctg
gagaaaaatcatgaataa
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