KEGG   Pseudoalteromonas piratica: OM33_00115
Entry
OM33_00115        CDS       T03513                                 
Name
(GenBank) DNA polymerase
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pseo  Pseudoalteromonas piratica
Pathway
pseo03030  DNA replication
pseo03430  Mismatch repair
pseo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pseo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OM33_00115
   03430 Mismatch repair
    OM33_00115
   03440 Homologous recombination
    OM33_00115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pseo03032]
    OM33_00115
   03400 DNA repair and recombination proteins [BR:pseo03400]
    OM33_00115
Enzymes [BR:pseo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     OM33_00115
DNA replication proteins [BR:pseo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     OM33_00115
DNA repair and recombination proteins [BR:pseo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     OM33_00115
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C
Other DBs
NCBI-ProteinID: AIY66225
UniProt: A0A0A7EHR9
LinkDB
Position
1:complement(27486..28091)
AA seq 201 aa
MLPEKDADILKANCFKTDYLVIDLELTGLNAKQDEIVSIAWVPISHQRIQIGSCQHFINN
QVNNLNQSPVFHGIDSDTLAEGVPLNEALKILNELIDDKILIFHNQELDWSFLRLAFNKA
GLLHKPLAILDTMQIEHKRLARQGQVIAQDSLTLNNCRERYRLPEYSCHNALTDAMATAE
LFLAQANQISRGKPLLIKHLM
NT seq 606 nt   +upstreamnt  +downstreamnt
gtgttgccagaaaaagacgctgatatattaaaagccaactgttttaaaaccgattattta
gtcattgatttagaactgacagggcttaatgcaaagcaagatgaaattgtctcgattgca
tgggtgccgattagccatcaacgcattcaaattggcagttgccagcattttatcaataac
caagtaaacaacttaaatcaaagcccggtttttcatggcattgacagtgacaccttagct
gaaggagtgccattaaatgaggcacttaagatattaaatgaactgattgatgacaaaata
cttatttttcataatcaagaattagactggtcattcttacgtctagcgtttaataaagca
ggcttgttacataagccgcttgcgattcttgataccatgcaaatcgagcataaacgctta
gcaaggcaaggccaagtgattgcacaagatagtctcactttaaacaattgccgcgaacgt
taccgcttacccgagtacagttgtcacaatgcgttaacggatgcaatggcgaccgctgaa
ttgttcttagcgcaagcaaatcaaataagtcgcggtaagccgttattaataaaacacttg
atgtaa

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