Pseudoalteromonas piratica: OM33_01250
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Entry
OM33_01250 CDS
T03513
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pseo
Pseudoalteromonas piratica
Pathway
pseo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pseo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OM33_01250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseo03400
]
OM33_01250
Enzymes [BR:
pseo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OM33_01250
DNA repair and recombination proteins [BR:
pseo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OM33_01250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
HHH_RecD2
Viral_helicase1
PIF1
AAA_11
SH3_13
AAA_14
nSTAND_NTPase5
nSTAND3
AAA_16
AAA_29
NPHP3_N
ATPase_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIY63933
UniProt:
A0A0A7EBQ2
LinkDB
All DBs
Position
1:296632..298824
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AA seq
730 aa
AA seq
DB search
MEDRLVMLNHKIRVTSISLGSYGGYIFSGKPIQGGKNLVCKVPYKIATRSPATGEVWEIT
GQKVNSDEYNNYIDLTDCHPIEIKSVLTKELLRWHLLKHYRFRGFGLGKAKIDKLLGKHG
IGAEALITLLNHNKWQHLTDLLSEHIAKSLCRNWQALNNHFETLQFLKENSIPVSVAKPL
LKVCGYNTVSRLESNPYSLIAFYDIAPNIWHSIERTAAKLGIEQDDPRRLIGLVEYCLYE
QLAMAHTACRREEIVAYLEKELGSYDATINALKTALKKKAICHVIYKGIKYYQLSSIGYI
EYEVEKEISSLLEHPSQEDIFIDVKSSIDVFKEEIYTRDGFYLTNAQLKAIKEAVTNRLV
IIDGYGGTGKTTILEGVVSVLKPEKSYVLALAGKAKERAKQSIGEGAEAFTIHGFIEKVK
TKKLAKNEKVKIIIDEASMVDILLIYRLIKSLKGIDYSLLLVGDRAQLSPIGVGLFFHRL
VNSDNDKIKVIKLREVHRTKAMGMLHKVSIGVRSGNLHKLEKWRGETEGVYLLPCDNQTQ
LFNRLLEVKQLMPNAQVVTAHVTESRKDSARLINNFIQSNIQSNQDIFMALGELKIMRND
WVIVNQNVHDLNLYNGNTGIVSSVYYSEEHGEICCNIVFDGNEITITKSNAWELGLQLAY
AISIHKSQGSEYDTTVVCAIESSKLLDRSMFYTAITRSRKLTLVAGKLEVAINAVKKPSR
FESLKSPFQV
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcgtttagttatgctgaaccataagattagagtcacctctataagtttaggc
tcttacggtggatatatattttcaggaaagccaattcaagggggaaaaaacctagtttgt
aaggttccttataaaattgcgacacgctcacctgctacgggagaagtatgggaaataaca
ggtcaaaaagtaaatagcgatgaatacaataactatatcgacttaacagattgccaccct
atcgaaatcaaatctgttttaactaaagagcttttacgatggcatcttctaaaacactac
aggttcaggggctttggtctgggaaaagctaaaattgacaagctattaggcaagcatgga
attggtgctgaagcattaattacactgctcaatcacaataaatggcaacacttaactgac
ttacttagcgaacacattgctaaatcgctttgccgaaattggcaagccctgaataaccac
tttgaaacacttcaatttttgaaagaaaatagtattccggtgagtgtggcaaaacctttg
cttaaggtctgtggctacaatacagtatctcgtctagagtccaatccgtattctctaatc
gctttttatgatatcgctcccaatatttggcacagcattgaaagaacggctgcaaaacta
ggaatcgaacaagacgatcctaggcgactaattggtctagttgaatactgtctctatgaa
caattagctatggctcataccgcttgcagaagagaagagattgtagcttatttggaaaaa
gagcttgggtcttatgatgcaacgataaatgctttaaagactgcactcaagaaaaaagca
atttgtcacgttatctataaggggatcaaatactatcaactttcttcgattggctatatc
gaatatgaagtcgaaaaggaaattagctcattacttgaacacccttcacaagaagacatt
tttattgatgtaaaatcttcaatcgatgtgttcaaagaagaaatttacacgagagatgga
ttctatttaacaaacgcacaattgaaagctattaaagaggctgttactaatagattagta
ataatcgatggctatgggggcacaggaaaaactaccattttggaaggtgtagtctccgtt
ttgaaacccgaaaaaagctatgttcttgctcttgcaggaaaagctaaagaacgagcaaaa
caatctattggtgaaggcgcagaagcttttacaatacatggctttattgaaaaggtaaaa
accaagaagctagctaaaaacgaaaaagttaagattataattgatgaagcttcaatggtt
gatattctgctgatatacagactaataaaatcattaaaaggtatcgactattccttgtta
ctggtgggagacagagcacaattatcccccattggagttggacttttctttcaccgttta
gttaacagtgataatgataaaataaaagttatcaaactcagggaagtacatagaacaaaa
gccatgggaatgcttcacaaagtatcaattggggttagatccggcaacttacataagctt
gaaaaatggagaggtgaaactgaaggcgtctacctattgccttgcgacaaccaaactcag
ctattcaacaggctgttagaagtgaaacaactaatgcctaatgctcaggttgtaactgca
catgttactgaatcccgtaaagactccgctagactgatcaataattttatacaaagtaat
attcagtctaatcaagacattttcatggctttaggtgagttaaagataatgagaaatgac
tgggtaattgttaatcagaacgtgcatgacctaaacctatacaacggtaatactggtatt
gttagctcggtttactactcagaagaacacggagaaatttgctgcaatattgtttttgat
ggcaatgaaataacaattactaaatctaacgcatgggaacttggtctgcagttagcctac
gcaatatcaatacataaatctcaaggttctgagtacgacacaacggttgtttgcgcaatc
gaaagcagtaaacttttagatagaagtatgttttatactgcaattactcgctccagaaaa
ctcactttagttgcaggtaaactggaagtagcaatcaatgcagttaaaaaaccaagtaga
tttgagtcactaaaatcaccttttcaagtttag
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