Pseudoalteromonas piratica: OM33_03425
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Entry
OM33_03425 CDS
T03513
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pseo
Pseudoalteromonas piratica
Pathway
pseo03420
Nucleotide excision repair
pseo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pseo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OM33_03425 (uvrD)
03430 Mismatch repair
OM33_03425 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseo03400
]
OM33_03425 (uvrD)
Enzymes [BR:
pseo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OM33_03425 (uvrD)
DNA repair and recombination proteins [BR:
pseo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OM33_03425 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
OM33_03425 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
DUF5906
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIY64309
UniProt:
A0A0A7ECJ3
LinkDB
All DBs
Position
1:complement(769319..771490)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSELLDGLNDNQREAVAAPLQNMLVLAGAGSGKTRVLVHRIAWLMQVEHASPYSIFAV
TFTNKAAKEMRSRVEATLKASVGGMWIGTFHGLSHRILRAHHKEANLPESFQILDTDDQV
RMIRRLMKAMNIDEKKWPAKQAAWYIGAKKDEGLRPKHIQAFDPNEQMMLRIYTAYQEAC
DRAGLVDFAEILLRCFELLRDQPTLLRHYQQRFPHMLVDEFQDTNTIQYQWLKLIAGKSN
KIMIVGDDDQSIYGWRGARIENIKQFISDFDAQTIRLEQNYRSTGNILKAANHLIANNSE
RMGKELWTDGNQGEQIGVYAAYNELDEARFIVSKIKAWFEQGNALQDCAILYRNNAQSRV
LESELNIQSPRIPYRIYGGMRFFERQEIKDALCYLRIVNNRNDDAAFERIINTPTRGIGD
RTLSLIRDCARSESLPLWYAAKTLLAEKHLAGRAANAVNSFIELIDQIEDNILDKSLDKQ
TKYAIQTSGLMAMYMAEKGEKGQARVENLEELINATSQYELPDEEEFSSPLDGFLAYTAL
ESGEGQADEHEDAVQMMTLHSAKGLEFPLVFMAGVEEGMFPSQQSQEETGRLEEERRLCY
VGMTRAMQKLYICHAESRRLYGQEKFHSPSRFIRELPEDCLDEIRVKTQITKPKTTGRFS
NTISLETFNDTGFKLGQRVMHGKFGEGTVLNYEGTGPQARIQVNFDDHGTKWLVTMYAKL
QAM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgaattattagatggtttaaatgacaatcaacgcgaagccgttgccgcc
ccgctacaaaatatgctggtgctagcgggcgcaggttcaggtaaaacccgcgtacttgtc
catcgaattgcttggttaatgcaagttgagcatgcctcaccttacagtatttttgcggta
acctttaccaacaaagcagccaaagaaatgcgtagccgtgttgaagcaacgcttaaggcg
tctgttggcggcatgtggattggcactttccacggcttatcccaccgtatccttcgcgcc
catcataaagaagcaaacctgccagaatcatttcaaattctcgacactgacgatcaggtt
aggatgatccgtcgcttaatgaaagcaatgaatattgacgagaagaaatggccggccaaa
caagcggcttggtatattggcgctaaaaaagacgaaggtttacgccctaaacatattcaa
gcgtttgaccctaatgaacaaatgatgctacgtatttacaccgcttaccaagaagcatgt
gaccgtgcaggtttagttgattttgccgaaattttactgcgttgttttgaattattacgt
gaccagccaactttacttcgtcactaccaacagcgttttccgcatatgctggtagacgaa
ttccaagataccaacaccattcaatatcaatggttaaagctaattgctggcaaaagcaac
aagatcatgattgtcggggatgatgaccaaagtatttatggttggcgtggcgcgcgtatc
gagaatattaaacagtttattagtgattttgatgcacaaactattcgcttagaacaaaat
tatcgctcaacaggtaatattctaaaggcggcaaaccatttaatcgccaataactccgag
cgtatgggtaaagagctgtggactgacggcaatcaaggtgaacaaattggtgtttatgcc
gcttataacgaacttgacgaagcccgttttattgttagtaaaattaaggcctggtttgaa
caaggtaatgctctgcaagactgcgccattttataccgcaacaacgcccagtcgcgtgta
ctggaatctgaattaaatattcaatcaccgcgaatcccttaccgaatttacggcggtatg
cgcttcttcgaacgtcaagaaatcaaagatgccttatgctacttacgcattgtaaataac
cgcaatgatgacgcggcatttgagcgaattattaataccccaacgcgcggcattggcgat
cgtactttaagtcttattcgtgattgcgcacgtagcgaatcattaccactttggtacgca
gcaaaaaccttacttgcagaaaagcatttagccgggcgcgctgccaatgcggttaattca
tttattgaactgatcgaccagattgaagataacattctcgataaatcgttagataaacaa
accaaatacgccattcaaacatcaggcctaatggcgatgtatatggcagaaaaaggtgaa
aaaggccaagctcgcgtagaaaacttagaagaattaattaacgcgactagccaatacgaa
ttgccagatgaagaagagtttagctcaccgcttgatggctttttagcgtataccgcactt
gagtcaggtgaggggcaagcagacgaacatgaagatgcagtacaaatgatgacactgcac
tcagccaaaggcttagagttcccattggtgtttatggcaggcgttgaagagggtatgttc
ccatcccaacaaagccaagaagaaaccggccgtttagaagaagaacgtcgcctgtgttat
gtaggcatgacacgtgccatgcaaaagctttatatttgtcacgcggaaagccgccgttta
tacgggcaagaaaagtttcacagtccgtcacgctttattcgcgaattaccggaagattgc
ttggatgaaattcgtgttaaaacacaaattactaagcctaaaaccacaggccgttttagc
aataccatcagcttagaaacctttaacgatactggctttaaactcggccagcgcgtaatg
cacggcaagtttggtgaaggtacggtgctaaactatgaaggcacgggcccacaggcgcgt
attcaagttaactttgatgatcatggtactaagtggctagtgaccatgtatgcgaaatta
caagcgatgtaa
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