Pseudoalteromonas piratica: OM33_04660
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Entry
OM33_04660 CDS
T03513
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pseo
Pseudoalteromonas piratica
Brite
KEGG Orthology (KO) [BR:
pseo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseo03400
]
OM33_04660
DNA repair and recombination proteins [BR:
pseo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OM33_04660
Archaeal homologous recombinant proteins
OM33_04660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
UBL_AVO1
Motif
Other DBs
NCBI-ProteinID:
AIY66290
UniProt:
A0A0A7EHX1
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Position
1:complement(1013731..1014942)
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AA seq
403 aa
AA seq
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MRIIHTSDWHLGQSFFNQSRQKEHHLLIKWLAEQVKTQQVDAVIIAGDIFDTGTPPSYAR
SLYSELILAMQAANCQLIVTAGNHDSVATLNEIKSLVKALNCHVVSQASEDVAEQIVAIS
KAEKTLGYVCAIPFLRSKDIVTSRADESIKEKQDNLAKGIYEHFENTFQAAQTLKADQDI
PIIMTGHLTAVGASSSESVRDIYIGHLSGINAHQLPNANYIALGHIHGAQKVGKEGNVFY
SGSPIALSFDELKHTKSVNLVEFNGQNVSQISQLEIPRFQAMQTIKGNLAEIKNALTVFA
EQTETTWLSIEVTTDDYISDLQNTVLDLTKDLPVEVLQLKRARKHVAKLSQQKQENLSEI
TPLEVFEKRIALEEFTTDDELARKERLTQHFISLLNTAKGAQS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcacacatctgactggcatcttggccagagcttttttaatcagtctcgg
caaaaagagcaccatttattaatcaaatggctagctgagcaagttaaaacgcagcaagta
gatgcggtgattatcgcaggagatatttttgatacaggcacgccgccaagttatgcgcgc
agcctctacagcgagcttattttggcaatgcaagcagcaaattgtcagttgattgttacc
gcaggtaatcacgattcagttgctacccttaacgagattaaaagcttagtaaaagcgctt
aactgccatgtggtatcgcaagcaagtgaagatgtcgcagagcaaatcgtcgctatctct
aaagcggaaaaaacattaggctacgtttgtgccattccgtttttacgcagtaaagacatt
gtcaccagccgcgccgacgaaagcataaaagaaaaacaagacaaccttgccaaaggcatt
tacgagcactttgaaaacacctttcaagccgcgcaaacattaaaagcagatcaagatata
ccgattattatgacgggccatttaactgcggtaggcgcatctagctcagagtcagtgcgc
gatatttatatcggccatctgtcaggtataaatgcccatcaactgccaaacgccaattac
atcgcccttggtcatattcatggcgctcaaaaagttggtaaagaaggtaatgtgttttat
agcggctcgccaatcgcccttagttttgatgaattaaaacacacaaaatcggtcaacttg
gttgaatttaacgggcaaaatgtgtcgcaaataagccaacttgaaatcccgcgctttcaa
gcaatgcaaaccataaaaggcaacctcgccgaaattaaaaacgcattaactgtatttgca
gagcaaactgaaacgacctggctgagcattgaagttaccaccgacgactatattagcgac
ctgcaaaataccgtgttagatctcaccaaagacttgcctgttgaagtattacaactaaaa
cgtgcgcgtaaacatgtagctaaacttagccaacaaaagcaagaaaacctgtctgaaata
acccctttagaggtttttgagaaacgtattgcacttgaagaatttacaacagatgacgaa
cttgcccgtaaagagcgtctaacccagcactttatttcactgctgaatacggcaaaagga
gcgcagtcatga
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