Pseudoalteromonas piratica: OM33_05325
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Entry
OM33_05325 CDS
T03513
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pseo
Pseudoalteromonas piratica
Pathway
pseo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pseo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OM33_05325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pseo03019
]
OM33_05325
03009 Ribosome biogenesis [BR:
pseo03009
]
OM33_05325
Messenger RNA biogenesis [BR:
pseo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OM33_05325
Ribosome biogenesis [BR:
pseo03009
]
Eukaryotic type
Pre-60S particles
RNases
OM33_05325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
HGTP_anticodon2
Motif
Other DBs
NCBI-ProteinID:
AIY64630
UniProt:
A0A0A7EDB8
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All DBs
Position
1:1185707..1186252
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AA seq
181 aa
AA seq
DB search
MAFHESNLIWLDLEMTGLEPSQDRILEIATVVTDSELNILAEGPVIAIHQSDEVLDAMDE
WCTNQHGSSGLTERVRKSSHSEEMAIRETISFLEKWVPKGASPMCGNSIGQDRRFLNVYM
RELEDYFHYRNIDVSTIKELVRRWSPDMLNLVKKQGTHLALDDIRESIAELRVYRQNIFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcttttcatgaatctaatttaatttggcttgatttggaaatgactggattagagccg
agccaagatcgcatcctagaaattgcgacagttgtgaccgactctgagctaaacattctg
gctgaagggcctgtaattgctattcatcagtctgatgaagtactggatgcaatggatgag
tggtgtactaatcaacacggtagttcaggtttaactgagcgtgtgcgaaaaagttcacat
tctgaagaaatggctatacgagaaacaatttcttttttagaaaagtgggtaccgaaaggt
gcatcacctatgtgtggtaattcaatcggtcaagatagacgctttttaaacgtgtatatg
cgagagctggaagattacttccactatcgtaatattgatgtgagcacaattaaagagctg
gttagacgatggtcaccagatatgcttaaccttgttaagaagcaaggcacgcacctagca
cttgatgatatccgcgaatcaattgctgaattacgcgtgtatcgccaaaatatcttcaaa
atttaa
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