Pseudoalteromonas piratica: OM33_06740
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Entry
OM33_06740 CDS
T03513
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pseo
Pseudoalteromonas piratica
Brite
KEGG Orthology (KO) [BR:
pseo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pseo03009
]
OM33_06740
Enzymes [BR:
pseo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OM33_06740
Ribosome biogenesis [BR:
pseo03009
]
Prokaryotic type
rRNA helicases
OM33_06740
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
GpA_ATPase
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIY64878
UniProt:
A0A0A7EEA8
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All DBs
Position
1:complement(1485515..1486744)
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AA seq
409 aa
AA seq
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MHFADLDLDPKLLNAIEKMGFDKPTSIQSLAIPAAMKGRDILASSPTGTGKTAAFLLGAM
QYLIDFPRRNPGFARVLIMTPTRELAYQVYEQANTLAAQTHLKIGVVTGGINYGSHKEIF
EKNNDILIATPGRLMDYLNSENFHAEDVEVLILDEADRMLDMGFRKEMLRICDEAKNRKQ
CFLFSATLEGDSVELFAERILNDPALLEATPSRREKGKIHQWVHLSDNREHKVEQLEAIL
KSEDVEKAIVFVKTRERLEQLVGELFAKDIKTTWLRGEMPQDKRLAALKSFDTGRTKVLI
ATDVAARGIDVADISHVINFDMPRTADIYVHRIGRTGRAGKKGTAISFIEAHDVEILAKV
ERYTEQKLKRRTIKGLEPKHKEAKLPAKKKKDPEKMKAKKKAKKKAKKK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcactttgctgacctagatcttgatcccaaattattaaacgccattgaaaaaatgggt
tttgataaaccgactagcattcaatcgctcgctattcctgcagcgatgaaaggtcgcgat
attttagcaagttcaccaaccggtacaggtaaaaccgcagcgtttttacttggtgcaatg
caatatctgattgatttcccaagacgtaatccaggttttgcgcgcgtactcataatgaca
ccaacacgtgaactagcctatcaagtgtatgaacaagcaaataccctagccgcgcaaact
caccttaaaattggtgtagtaacaggtggtattaactacggtagccataaagaaattttt
gaaaaaaataacgatattctgattgctacacctggtcgtttaatggattacttaaattca
gaaaacttccacgcagaagatgttgaagtgcttattcttgatgaagcagaccgcatgtta
gacatgggttttcgtaaagaaatgctgcgtatttgcgacgaagctaaaaaccgtaagcaa
tgctttttattctcagccacactagagggcgacagcgttgagctatttgcagagcgcatt
ctaaatgatccagcgttacttgaagcaaccccatcgcgtcgtgaaaaaggcaaaatccat
cagtgggtgcatttatcagataaccgcgaacataaagtggagcaactagaagcgatttta
aaatcggaagacgttgaaaaggccattgtattcgttaaaacacgtgaacgtttagagcag
ctagttggtgagctattcgcgaaagacattaaaaccacgtggctgcgtggtgaaatgcct
caggataaacgcctagcagcactaaaaagctttgatactggccgcactaaggtactcatt
gcgaccgacgtggccgcacgtggtattgatgtggctgatattagccacgtaattaacttt
gatatgccgcgcactgccgacatttacgtacaccgtattggtcgcaccggtcgcgcgggt
aaaaaaggcacagcgatttcatttatcgaagcccatgatgtggaaattttggcaaaagtt
gagcgctacacagagcaaaaacttaaacgccgtacaattaaaggcctagagccaaaacac
aaagaagctaaactaccggcgaagaagaaaaaagatccggagaaaatgaaggcgaaaaag
aaagccaagaaaaaagcgaaaaagaagtaa
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