Pseudoalteromonas piratica: OM33_08735
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Entry
OM33_08735 CDS
T03513
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pseo
Pseudoalteromonas piratica
Pathway
pseo03030
DNA replication
pseo03430
Mismatch repair
pseo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pseo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OM33_08735
03430 Mismatch repair
OM33_08735
03440 Homologous recombination
OM33_08735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pseo03032
]
OM33_08735
03400 DNA repair and recombination proteins [BR:
pseo03400
]
OM33_08735
Enzymes [BR:
pseo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OM33_08735
DNA replication proteins [BR:
pseo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OM33_08735
DNA repair and recombination proteins [BR:
pseo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OM33_08735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
RNase_H_2
vATP-synt_AC39
DUF6551
Motif
Other DBs
NCBI-ProteinID:
AIY65239
UniProt:
A0A0A7EF33
LinkDB
All DBs
Position
1:1885570..1886286
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AA seq
238 aa
AA seq
DB search
MAHRQIVLDTETTGIDPKQGHRIIEIGCVELVNRRLTGNNFHVYIDPERGIEDEAIFVHG
ITSDFLAGKPKFRDVAAEFLDYIKGAELVIHNAAFDVGFMDHEFALLRQSYPKTHDVCEV
LDTLAMARDLHPGQKNNLDALCRRYDIDNSKRTLHGALLDSEILADVYLGMTGGQVSLNL
ANQEGQSGENSKGIRRLSSDRPRLNVIFADNDEQSAHIERLNLVNEKGGQCLWLTEEA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggctcacaggcaaatagtactggatacagaaaccacaggtatcgatccaaaacaagga
caccggattattgaaatcggttgcgttgaattagtaaaccgtagactgactggtaacaat
tttcatgtatatattgatccggagcgtggcattgaagatgaagcaatctttgttcacggt
attacctctgatttcttagcgggaaaaccaaaatttcgagatgtggcagcggaatttttg
gattacattaaaggtgccgaattggttattcataatgcggcgttcgacgtcggctttatg
gatcatgaatttgctttattaagacaaagttatccaaaaacacacgatgtgtgcgaagta
cttgatacgctagcgatggcgcgtgatttgcacccgggacaaaaaaataacttagatgca
ctttgccgtcgatacgatattgataattcgaaacgtacccttcacggcgcattgctcgat
tccgagatccttgcagatgtttatttaggcatgaccggtggtcaagttagtttaaacttg
gccaaccaagaaggacaaagtggagaaaatagtaaagggatcagacgactttcatcagat
agacctcgattaaatgtcatatttgccgataacgatgaacagagtgcgcatatcgagcgt
ttaaatttagtcaacgaaaaaggcggtcagtgcctttggcttactgaggaagcataa
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