Pseudoalteromonas piratica: OM33_09725
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Entry
OM33_09725 CDS
T03513
Name
(GenBank) hypothetical protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pseo
Pseudoalteromonas piratica
Pathway
pseo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pseo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OM33_09725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseo03400
]
OM33_09725
Enzymes [BR:
pseo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OM33_09725
DNA repair and recombination proteins [BR:
pseo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OM33_09725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIY65398
UniProt:
A0A0A7EFS3
LinkDB
All DBs
Position
1:2087997..2091566
Genome browser
AA seq
1189 aa
AA seq
DB search
MQKLNPMAMPLCGANLIEASAGTGKTYTITALYLRLLLGFSKDGEKQTPLSIEEILVVTF
TEAATAEIKDRVRQRLITLRDKLLGKDTKDEVVNQLFELIDDHHSAFYRIDSAVKSLDDA
AIFTIHGFCQRMLKQHAFESGMAFNLQFIMDQSELLETAIKDFWRQFVFPLNKQSYAAVT
NCFASPDIILKNLFGLLSRTGIEITPQYSFDDALLLQTQLHEKAKNLKSKVLAQEFIGFI
ENTPFKKSKPIASSKNLGLLKAYCESDEVIFEGASKRSFEIWGEQAFADKGNYLKDKIPV
THTLATEFDELSALKEKAEAALPVSILISAYHYLVDWLLSEKQKHQLINPDDLLKNLSQA
LESNKSGELANAILAQYPVALIDEFQDTDPIQYGIFANIYLRNSSVSDKDNALIMIGDPK
QAIYGFRGADIFTYIDAKHQVPIDSHYTLDTNYRSSKQIVDGVNSIFSLKEDSFIFNKDI
PFAKVNAFGKSEEDGLFVDGKGKSGIHFCVLDELENTIAKGTGDNQLAAICASQISSLLI
AGKDKRAVIEKTPLKASDIAVLVRDRNQANMIKTALQKLGVASVFLSRDSVFETPLASHL
LTFLSALLAPYNEATFRGVLVGPLFALNYADVHQLTQNTKAWEDTLDTFAALKLLLQQKG
VMAVIESLVEQNALPSRWQQKGWDVARLLTDIRHLGELLQQKQLSLNSYHRLLHWLHDQI
TKFAAEGSQLRLETDQQLVNIVTMHGSKGLEYPVVYMPFVASFRENSEAVYHDENGTLIY
DLSPSENAKAIANKESLAEDLRLLYVALTRAVHYLVVGLYNCKDGRSKNPGISKTPLGHL
LFDKDDIDTGHDWFAQLSSFCAEHSGLTASCYSEPETAEVYTLESTDDTECLVKQKKHAV
PNQWRLTSFSSLTKVSHGDSEAFDYKQGASDEMHLLDWQAAANNLVQNEFSFPKGANAGS
CLHAIMEEIDFNAPNSPVFKQKLPISEVVEKQLLAYQIESEWQSVVENWMVNLLKAPLTP
LSISMSELDMAQCLIEMEFMLPVKTLVTNKLNEILLAQSRDHFTPLTQATISGMLKGFID
LIFCYDGRYYVLDYKSNYLGESGDDYNQDNMESVMSSHHYHLQYLLYTVALHRLLKSRIR
NYDIHTHLGGSFYLFMRGMPSGQGVYYNAPSVEQVLALDSLFDKGTFNA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagcttaatccaatggcaatgccactgtgtggcgcgaacttaatagaagcaagt
gcgggtacaggtaaaacttacaccattactgcactttatttacgcttgttactgggcttt
agcaaagacggtgaaaaacaaacgccgcttagcatcgaagaaattctggttgtgacgttt
accgaggccgccaccgctgaaattaaagaccgggtgcgccaacgcttaattactctgcgc
gataaactgctgggtaaagacacaaaagacgaggtggttaaccagctgtttgaattgatt
gacgaccaccacagcgcgttttatcgcattgatagtgctgttaaatcccttgatgatgca
gcaatatttaccattcacggcttttgccaacgcatgctaaagcaacatgcgtttgaatcg
ggtatggcgtttaacttgcagttcattatggatcaaagtgagttgcttgaaacggcgatt
aaagatttctggcgtcagtttgtatttccactcaataaacaaagctacgcagccgtcacc
aactgttttgcatccccagatatcattctaaaaaacttgtttggtttgctcagtcgcaca
ggcatcgaaattaccccgcaatacagctttgatgatgcattattgttgcaaacccaatta
catgaaaaagctaaaaacttaaaaagcaaagtgttagcccaagaatttattggttttatt
gaaaatacgccgtttaaaaagtctaaaccaattgcgagcagtaaaaacttgggtttatta
aaggcctattgtgaaagtgatgaggttatctttgaaggtgcttctaaacgctcctttgaa
atttggggtgagcaagcatttgccgataaaggcaattatttaaaagataaaatacctgtt
actcatacgcttgcgacagagtttgacgaattaagcgcgcttaaagaaaaagccgaagct
gcgttgcctgtttcaattttaattagtgcctatcattacttagtcgattggcttttaagc
gaaaagcaaaagcatcaattgattaaccctgatgacttgctaaagaacttaagccaagca
cttgaaagtaacaaaagcggggaactggccaatgctattttagcgcagtacccagtggcg
ttaattgacgaattccaagatactgatccaatacaatatggcatttttgccaatatctat
ttacgcaatagcagcgtgtcagacaaagacaatgcactaattatgattggcgacccgaaa
caagctatttatggctttcgtggtgctgacatatttacctacattgatgctaagcaccaa
gtccccattgatagccattatacgcttgataccaactatcgttcttccaagcagattgtt
gatggtgttaatagtattttctcgctgaaagaagatagctttattttcaataaagacatt
ccttttgccaaggtaaatgcctttggcaaaagtgaagaagacggtttatttgttgatggt
aaaggcaaatcaggcattcatttttgtgtacttgatgaattggaaaacacgattgctaaa
ggtacgggggataatcaactcgccgccatttgcgcatcccaaatttcatcgttactgata
gctggaaaagataaacgtgccgtaatagaaaaaacaccacttaaagccagtgatattgcg
gtactggtgcgtgatagaaaccaagcaaatatgatcaaaacggcgctgcaaaaactaggt
gttgccagtgtgtttctctctcgtgacagtgtgtttgaaacgcccttagcaagtcattta
ttaacgtttttgtctgcgttacttgcaccctacaatgaagcaacttttcgtggcgtgtta
gttgggccgctttttgcgcttaactatgcagatgtgcatcaacttacgcaaaataccaaa
gcgtgggaagacaccttagatacctttgctgcacttaaattactgctgcagcaaaaaggc
gtgatggcggttattgagtcattggttgagcaaaacgcactgccgagccgctggcaacaa
aaaggctgggacgtcgcgcgcttactcactgatattcgccacttaggtgagttactacag
caaaaacagttgtcattgaatagctatcatcgtttattacattggctgcatgatcaaatt
actaaatttgccgcagaaggatcgcagcttcgcttagaaaccgaccagcaactggttaat
attgtgacgatgcatggttcaaaaggccttgaataccctgtggtttatatgccgtttgtc
gctagctttagagaaaacagcgaagcggtttaccacgatgaaaatggcacacttatttat
gatttaagcccatcagaaaatgcaaaagctattgccaataaagaaagccttgctgaagat
ttgcgtttgctctacgtagcacttacgcgtgctgttcactacttagtagtgggactttat
aactgtaaagacggccgaagtaaaaaccctggtattagcaaaaccccgcttggacacctg
ttgtttgataaagatgatatcgatactggccatgattggtttgcacagctcagcagtttt
tgtgctgagcattctggattaactgcaagttgttactctgagcctgaaacagctgaggtt
tataccttagagagcaccgacgatactgagtgcttagttaaacaaaaaaaacacgctgtg
cctaatcagtggcgattaaccagcttctcttcacttacaaaggtaagtcatggtgatagc
gaagcgtttgattataaacaaggtgccagtgatgaaatgcatttgcttgattggcaagcg
gctgcaaataatcttgtgcaaaacgaatttagttttccgaaaggggcgaatgcaggtagt
tgcttacacgctattatggaagaaattgattttaatgctcctaactcaccggtgtttaaa
caaaagttacctattagtgaagtcgttgaaaaacagctgttggcttatcaaattgagagt
gaatggcaaagtgtagttgaaaactggatggttaatttgctgaaagctccattaactcca
ctgtcaatttcgatgagcgaacttgatatggcgcagtgtttaattgaaatggagtttatg
ctgccagtgaaaacattggtaactaataagcttaacgagattctgttagcacaaagccgc
gatcactttacgccactcactcaggcaaccatcagcggcatgttaaaaggctttatcgat
ttaattttctgttatgacggccgctattatgttctcgattataaatccaattacctaggt
gagagtggggatgattacaaccaagataatatggaaagtgtcatgagttcccaccactac
catttacaatatttactgtataccgttgcactgcaccgtttattaaaaagccgcattcgt
aattatgatattcacacccatttgggcggcagtttttatttgtttatgcgcggtatgcca
tcaggacaaggtgtttattacaatgcgcccagtgtcgaacaagtgttagcgctcgatagt
ttattcgataaggggacatttaatgcgtaa
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