Pseudoalteromonas piratica: OM33_12750
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Entry
OM33_12750 CDS
T03513
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pseo
Pseudoalteromonas piratica
Pathway
pseo03030
DNA replication
pseo03430
Mismatch repair
pseo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pseo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OM33_12750 (dnaE)
03430 Mismatch repair
OM33_12750 (dnaE)
03440 Homologous recombination
OM33_12750 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pseo03032
]
OM33_12750 (dnaE)
03400 DNA repair and recombination proteins [BR:
pseo03400
]
OM33_12750 (dnaE)
Enzymes [BR:
pseo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OM33_12750 (dnaE)
DNA replication proteins [BR:
pseo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OM33_12750 (dnaE)
DNA repair and recombination proteins [BR:
pseo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OM33_12750 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AIY65897
UniProt:
A0A0A7EIT5
LinkDB
All DBs
Position
1:complement(2749537..2753028)
Genome browser
AA seq
1163 aa
AA seq
DB search
MQDPKFIHLRVHSDYSMVDGLAKTKPIVGKIAEQKMPAFAITDQMNLCGLVRFYGAAHGA
GIKPIVGADLWLHSPEFPDEPCRLVVLAKNNQGYKNLTLLISKAFKRGHIMQRPMVDRDW
LIEHKEGLILLSGAKDGDLGKALLKGNNDLTKSIGNFYLEHFKDHYYIELTRTEREQEED
YLHSAVAYAQYSGLPVVATNEVVFLNKEDFEAHEIRVAIHDGFTLDDKRRPKRFSEQQYL
KTEEQMCELFSDIPEALENSVEIAKRCNVTIQLGTYFLPDYPTGSLSIEDFLVKVSEDGL
EERLQFLFPDEEERKVKRVEYDDRLKIELDVINQMGFPGYFLIVMEFIQWSKDNIIPVGP
GRGSGAGSLVAYALKITDLDPLQFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAK
LYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPGDPGMTLAKAFDVEPR
LPEAYDTDDEVKELIDMCRILEGCTRNAGKHAGGVVISPTTITDFAALYCDDEGKFPVTQ
FDKNDVETAGLVKFDFLGLRTLTILQWAIDMANERLTREQKEHIDIAAIPLDDPPSFELL
LRAETTAVFQLESRGMKDLVRRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGRED
VSYPDAQYQHESLQPILEPTYGIILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEM
AKQRSTFEEGAKQNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHYPA
EFMAAVMSADMDNTDKIVTLVDECENMKLTLLPPDVNSGLYKFTVNHQGQIVYGIGAIKG
VGEGPVEAILEARESGGPFKDLFDFCARVDIKRLNKRVIEKLIMAGAMDKLGPEQTQSAR
STLIASLPDALKSADQHNKAEALGQSDLFGLLATEPEEVAAAFVQAPKFTDNEWLEGERE
TLGLYLTGHPINQYRAELKNYVSGRLVDLQPTERDVTSTAAGLVINARTLINKKGKRWGL
LTLDDKSARIDIRLFPEQFETYQELLQMNNILVISGVVSFDNFSGGITMTAREVASIESV
REKRVKNIKMTVKMQEVNDNFLSRLEHAITPYKFGTCPIRIQYERPDATTELSLGTQWCV
TPSDELLANLSRLVAQNIELEFN
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaccctaaatttatacacttacgtgttcacagtgattattcaatggtggacggc
ttagcaaaaactaagcctattgtcggtaaaattgcagagcaaaaaatgcctgcatttgcc
attactgatcaaatgaatttgtgcggtttagtgcgcttttacggtgcggcgcatggtgct
ggcatcaaacctatcgttggtgctgatctgtggttacacagtcctgagtttcccgatgaa
ccttgtcgtctagtagtgcttgccaaaaataatcaaggctacaaaaatttaaccctgtta
atttctaaagcatttaagcgtggccatattatgcagcgcccaatggttgatagagattgg
cttattgagcataaagaagggttaattttactctctggtgcgaaagatggtgatttaggt
aaagccttattaaaaggtaataacgaccttacaaaatctattggtaacttctatttagaa
cactttaaagatcattactatattgagctaacgcgaactgaacgtgagcaagaagaagat
tatcttcatagtgcagttgcttatgcccaatattcaggtttgccagttgttgccaccaat
gaagtcgtgtttctcaataaagaagactttgaagcccatgagattcgcgttgctattcac
gatggttttacccttgacgataaacgcagaccaaaacgtttttcagagcagcaatattta
aaaaccgaagagcaaatgtgtgagttgttctcggatattccagaagcactggaaaactcg
gtagaaattgccaaacgttgtaatgtaaccattcagttaggtacatatttcttacctgat
tacccaacaggttcgctgtcgattgaagatttcttagtaaaagtatcggaagacggtctt
gaagaacgtttacagtttttattcccagatgaagaagaacgcaaagtcaaacgtgtcgaa
tatgatgaccgtctaaaaatcgaacttgatgtaatcaaccaaatgggtttccctggttac
ttcttgatcgtaatggaatttatccagtggagtaaagataacattattcccgtcggacca
ggacgaggctcgggtgcaggttcattagtagcctatgcacttaaaatcaccgatttagat
cccttacaatttgacttacttttcgaacgtttcttgaacccagaacgtgtatcaatgccc
gatttcgacgtcgatttctgtatggatcgccgcgatgaagttattgaccatgttgctaag
ctctatggccgtgatgcggtatcacagatcattacctttggtacaatggcggctaaagcg
gtaatacgtgatgtaggccgtgtgcttggccacccgtatggttttgttgaccgtatttca
aaattagttccgggcgatccgggcatgacattggcaaaagcttttgatgttgaaccacgt
ttacctgaagcttacgacactgacgatgaagtgaaagaacttatcgatatgtgccgcatt
ttggaaggttgtacacgtaacgcaggtaaacacgcaggtggtgttgttatttcaccgaca
accattaccgatttcgcagcgctatattgtgatgacgagggtaaattcccggttacgcaa
tttgataaaaacgatgtagaaacagcaggccttgttaagtttgacttcctagggttacgt
accttaaccattttacaatgggctatcgatatggccaatgagcgcttaacgcgcgaacaa
aaagagcatatcgatatcgctgcaataccacttgatgatcctccaagctttgagttactg
ttgcgcgccgaaacgaccgcagtattccagcttgaatctcgcgggatgaaagatcttgtt
cgtcgtttaaaacctgactgctttgaagatatgatcgcactggttgcacttttccgtcca
ggtcctttgcaatcaggcatggtagataactttatcgaccgtaaacacggccgagaagat
gtatcgtatcctgatgcacagtatcagcacgaaagcctacagcccattcttgaaccaact
tacggtattattctttaccaagaacaggtaatgcaaattgctcaggttcttgcaggctat
agcttaggtggtgctgacttactacgtcgtgctatgggtaagaaaaagccggaagagatg
gccaagcaacgctcaacctttgaggaaggagcgaagcaaaatggcgtagatggcgaactg
gcgatgaagatcttcgatcttgtagaaaagttcgcaggttacggctttaacaaatcgcac
tcggcagcatacgcgctggtatcttatcaaaccctctggatgaaaacccattatcctgca
gagtttatggccgcagtaatgtcggcagatatggataacaccgataaaatagttaccttg
gtagatgagtgtgagaatatgaaactcacattattgccgcctgatgttaattctggtttg
tataaattcacggtaaaccaccaaggacaaatcgtttacggaattggtgccattaaaggt
gtgggtgaggggcctgtcgaagctattttagaagcgagagagagcggcggtccatttaaa
gatttgtttgatttctgcgcccgtgttgatattaaacgtttaaataaacgtgtcattgaa
aagctaattatggctggtgccatggacaaacttggcccagagcaaacacaaagtgcgcgc
tctacgcttattgctagtttgccagatgcgcttaaatccgccgatcaacacaacaaagcc
gaagcacttggtcaaagtgatttatttggtttattggcaacagaacctgaagaagttgct
gctgcatttgttcaagcgcccaaatttactgataacgaatggttggaaggcgagcgcgaa
acactgggactttatttaactggtcatccaattaatcaatatcgcgcggagcttaaaaat
tatgtgtcagggcgtctagtcgatttacaaccgacggagcgtgatgtaacgtcaactgcg
gcaggtttagtgatcaacgcgcgtaccttaattaataaaaaagggaagcgttgggggtta
ctcacattagatgataaaagtgcccgaattgatattcgtttatttcctgaacagttcgaa
acttaccaagaactgctgcaaatgaacaatatcttggtgatatctggtgtggtcagcttt
gataacttctcaggtggtattacaatgaccgctcgcgaagttgcaagtatcgaatctgtt
cgcgaaaaacgggttaaaaatataaaaatgacggtgaaaatgcaggaagtgaatgataac
ttcctgtctcgtttagagcatgccatcaccccgtacaaatttggtacttgcccgataaga
attcaatatgaacgcccagatgcaacaactgagctttcattaggaacacagtggtgtgtt
acacctagtgatgagttacttgctaatctctcacgcttagtagcacaaaatattgaacta
gaatttaattag
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