Pseudoalteromonas piratica: OM33_18740
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Entry
OM33_18740 CDS
T03513
Name
(GenBank) RNase D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pseo
Pseudoalteromonas piratica
Brite
KEGG Orthology (KO) [BR:
pseo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pseo03016
]
OM33_18740
Enzymes [BR:
pseo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
OM33_18740
Transfer RNA biogenesis [BR:
pseo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OM33_18740
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
AIY67108
UniProt:
A0A0A7EKR6
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All DBs
Position
2:complement(882827..883951)
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AA seq
374 aa
AA seq
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MQYALITEQKDLDSAITRYSTKPILAVDTEFMRRRTLYPELALLQVYDGESICLIDPTAD
LDLSSFWDLMENTQIIKVLHSPSEDLEVFSRHGNCIPKPLFDTQFALSLLGERNCVGFAN
MVEMLLDEQIDKSESRTNWLQRPLTKAQLDYAAADVHYLMPCYQLIIEKLCSKKQEIVIS
ESELIAQKRAFDTPLELAYLDIKNAWQLNPKQLCVLQQLASWRLNRAREKNLALNFIVKE
SILFEIAKQQPTHFGALKRVCEGDQGLINRYGKTLIHLVKVALEKREEDYPSKIKRLIDF
SGYKKSLKEMRAQLESVAKKNDIPLDVLASKKQMNQLISWKWKEKSETVGYLKPDLMSSW
RKDLVKNELSQWFN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgcaatacgcattaataacagaacaaaaagatcttgattcagctataactcgttactct
acgaaacctattctagcagttgataccgaattcatgcgccgtcgtaccttatatccagaa
ctagcgttattacaagtttatgatggcgagtccatttgtttaattgacccaactgcagac
ttagacttatcttctttttgggacttaatggaaaatacacaaattattaaagtattacat
tcaccgtcagaagacttagaagttttttctcgccatggtaattgcattccaaaacctttg
tttgatacacaatttgcgttaagtctattaggagaacgtaattgcgttggctttgccaac
atggttgaaatgttacttgatgaacaaatagataaaagtgaatcgcgtacgaattggttg
caaagaccattaacgaaagcgcagttagattatgctgcagccgatgttcattatctaatg
ccctgctaccaattaattattgaaaaactatgttcgaaaaagcaagagattgtaatcagt
gagagtgaattgattgcacaaaaacgtgcttttgatacaccacttgagttagcctacctc
gatatcaaaaatgcatggcaacttaacccaaaacaattatgcgtgttgcaacaacttgca
tcttggcgcttaaatcgtgctcgcgagaaaaatttggcacttaattttatagtaaaagaa
tcaattttatttgaaatagcaaaacaacaacctacccattttggcgcgttaaagcgtgtc
tgtgaaggcgaccaaggactaattaatcgttatggcaaaacgcttattcacttggtaaaa
gttgcacttgaaaaaagagaagaggattacccatctaaaattaaacgtttaattgatttt
agtggctataaaaaatcattgaaagaaatgcgcgcccaacttgagtcggttgccaagaaa
aatgatattccacttgacgtacttgccagtaaaaaacaaatgaatcaattaattagttgg
aaatggaaagaaaagagtgaaactgtgggttatttaaaaccagacttaatgtcctcttgg
cgtaaagatttggtaaaaaatgaattatctcaatggttcaactaa
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