Pseudoalteromonas piratica: OM33_20340
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Entry
OM33_20340 CDS
T03513
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pseo
Pseudoalteromonas piratica
Brite
KEGG Orthology (KO) [BR:
pseo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pseo03000
]
OM33_20340
Transcription factors [BR:
pseo03000
]
Prokaryotic type
Helix-turn-helix
Other families
OM33_20340
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
MarR
Motif
Other DBs
NCBI-ProteinID:
AIY67384
UniProt:
A0A0A7EL67
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All DBs
Position
2:complement(1257221..1258093)
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AA seq
290 aa
AA seq
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MDIINKIKEGLGHFSPAEDKVARLILDDLDFAATASINELANKANVSHASITRLAKSLGC
DNVRDLKFQITQSAAIGERFTNADVIEKKDIFHVYSSIQEILALNVGLIQEAEVNAAAEL
ICNTRHCLIFGVGGGSSMLAMECQNRLFRLDILCNAHSDPMMMRMTASTINKNDVVLCLS
LSGVSPDVIDSARIAKEYGAHIIAICPEGELAELADVHLPIKTQESDYIFKPSAARYVMM
AAIDILSSEVATKNQRRSKEKLRRLKIQLDQHRHQKSDAPPADTRFPLGD
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtggatattattaataaaattaaagaaggactcggtcatttcagcccagcagaagataaa
gttgcgcgcttgattttagatgatctcgattttgctgcgactgcatcaattaatgagtta
gcaaataaagcgaatgttagtcacgccagtataacgcgtttagccaaaagtttaggctgt
gacaatgtacgtgatttaaaatttcaaattacccaatcggcagcgattggtgagcgcttt
acaaacgcagatgtgattgagaaaaaagatatttttcatgtttattcatcgatacaagaa
atcttggcgctaaatgttggtcttattcaagaagctgaagtaaatgctgcagctgaactc
atttgcaatacacgtcattgccttatttttggtgtaggtggtggcagtagcatgctagcg
atggaatgccaaaatcgtttattccgcttagatatactctgcaatgcccattctgatcct
atgatgatgcgcatgacagcatcaacgattaataagaatgatgtggtgctgtgtttatcg
ttaagtggtgtatcacccgatgtgattgattcagcacgcatcgcaaaagagtatggcgca
cacattattgccatctgtccagaaggtgaactcgccgaactcgccgatgtgcatttgccg
atcaaaacacaggaaagtgactatatttttaaaccgagcgccgcgcgctatgtgatgatg
gcggctattgatattttatcgagtgaagtggcgacaaaaaatcagcgtcgttctaaagaa
aaactacgtcgtttaaaaattcaattagaccaacatcgtcatcagaaaagtgatgcgcca
cctgccgacacacgctttccactgggcgattaa
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