Pseudoalteromonas piratica: OM33_21560
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Entry
OM33_21560 CDS
T03513
Name
(GenBank) protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pseo
Pseudoalteromonas piratica
Brite
KEGG Orthology (KO) [BR:
pseo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pseo03009
]
OM33_21560
Ribosome biogenesis [BR:
pseo03009
]
Prokaryotic type
ribosomal protein modification factors
OM33_21560
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
DUF1127
Motif
Other DBs
NCBI-ProteinID:
AIY67583
UniProt:
A0A0A7EM18
LinkDB
All DBs
Position
2:1558854..1561037
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AA seq
727 aa
AA seq
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MEIKVNYLDNLRLEALFDDFNVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKVYCN
ARDIPTNDIRLSQNNIVDPENRYNQIFKIQVELPESISDKDREGILRSIDRCTVKKVIQT
GPEFVVEAVENLDEDAQAMLMGQPEGDTNTMILGKDLPLEQTIQNMTKILEDLGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGASKESALCSALGEFIERLNCNFFYNDQFFGEE
IANSDFVHYPNEKWFKPGPEDELPNEILDDYTLDIYDPEQELRGSNLIDTNSGNVERGIC
SIPYTRHSDGETVYFPSNLIENLFLSNGMSAGNNLAEAKVQCLSEIFERAVKRQIIEQEI
VLPDVPEDVLNKYPSIVAGIKGLEEQGFPVVIKDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVQEPENFVEHFIDSTGTISWRF
FSAKYDYEFVEWDFSGTNQEECDALFGILEDIGKEAYVAEFTGLGTACRILVPGYSEVYP
AEDLIWDNTNKALLYRDDILNLHSLSDDELADLVNRLEESELDNYIDIITLIGIEFDENT
VWGQLTILELKLLIYLALGDLEEVNNLVESFLQYNDNTVERGLFYQALHATLQVALDDEL
EFEDYQHNFTRMFGEEVMNAIIGSINGDVRFYGLTPTNSQLEGLDKHLRLIESYKKLHSA
RAKLAGK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagtaaattatcttgataacttgcgcttagaagcgctgtttgacgacttt
aacgttattgccgatcagcctattcgctataaaggcgatggtagcgcacctggtccattc
gattattttcttgcctcatctgcgctgtgtgcggcgtattttgtaaaggtgtactgtaac
gcgcgcgatattccaacgaacgatattcgcctgtcgcaaaacaatattgttgaccctgaa
aaccgttacaaccaaatttttaaaattcaggtagagctgccagagagcatttctgacaaa
gaccgtgaaggtattttacgttcaatcgaccgttgtaccgttaaaaaggtaattcaaaca
ggcccagagtttgttgtagaagcggttgaaaacctcgatgaagacgcacaagccatgtta
atgggtcagcctgagggcgacaccaataccatgattttaggtaaagacttaccgcttgag
caaaccattcaaaacatgaccaagattttagaagacttgggtatgaaaattgaaatctca
tcgtggcgtaacattgtgccaaacgtatggtcgcttcatattcgcgatgcagcatcacca
atgtgttttaccaatggtaaaggcgcaagcaaagaaagcgcgctgtgctcggcacttggc
gaatttattgagcgtttaaactgtaactttttctataacgatcagttctttggtgaagaa
attgccaatagcgattttgtccattacccaaatgaaaagtggtttaagccaggcccagaa
gacgagctaccaaacgagattttagacgactacacgctagatatttacgacccagagcaa
gagctgcgtggttctaacctgattgacactaactcaggaaatgttgagcgcggtatttgt
tcaattccgtatacccgtcattcagacggcgaaacggtttatttcccgtcaaatctgatt
gaaaacttatttttaagtaacggtatgagcgcgggtaacaaccttgccgaggccaaagta
cagtgtttatcggagatttttgagcgcgcggtaaaacgccaaatcatcgagcaagaaatt
gtattaccagatgtaccagaagacgtactgaataaatacccaagcatagttgcgggtatt
aaagggctagaagaacaaggcttccctgtcgtcattaaagatgcctcacttggcggccag
ttcccagtaatgtgtgttaccttaatgaacccgaaaacgggcggcgtatttgcatcattt
ggtgcgcacccaagttttgaagtagcgcttgagcgaagccttactgagctattacaaggc
cgcagttttgaaggcttaaacgatgtacctaagccaacttttaactcaatggcagtacaa
gagccagaaaactttgttgaacactttattgattcaacaggcaccatttcttggcgtttc
tttagtgccaagtatgattacgagtttgttgaatgggatttctctggcactaaccaagaa
gagtgcgatgccctattcggtattttagaagacatcggtaaagaagcatatgttgctgaa
tttactggccttggtaccgcatgccgtattttagtaccgggttattctgaggtttaccca
gcagaagacttaatttgggataacaccaataaagcccttttataccgcgacgatatttta
aacctacattcactgtctgacgatgaactagctgatttagttaatcgtttagaagagagc
gagctcgataactacattgatatcattaccctaattggtattgaatttgatgaaaacaca
gtgtggggtcagcttactattctagagcttaagctattaatttacttagcattaggcgat
ttagaagaagtaaacaacctcgttgaaagcttcttacagtacaacgataacaccgttgaa
cgcggcctattctaccaagcgctgcacgcaacactgcaagtagcacttgatgacgagctt
gagtttgaagactaccagcataacttcacgcgcatgtttggcgaagaagtaatgaatgcg
attattggctcaattaatggcgatgtgcgtttttatggtttaacaccaactaactcacag
ctagaaggcctagataagcacctgcgcttaatcgaaagctacaaaaagctgcacagcgct
cgtgcaaaattagcaggcaagtaa
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