Pseudomonas sessilinigenes: C4K39_0279
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Entry
C4K39_0279 CDS
T07575
Name
(GenBank) Transcription accessory protein (S1 RNA-binding domain)
KO
K06959
protein Tex
Organism
psep
Pseudomonas sessilinigenes
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
C4K39_0279
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
S1_RRP5
HHH_7
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AZC21986
LinkDB
All DBs
Position
complement(313891..316215)
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AA seq
774 aa
AA seq
DB search
MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRY
LRELDDRRTSILASIEEQGKLTPELAREIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPSLTPEAEAARFVDGEKGVADIKAALEGAKYILMERFAEDASLLDKLRT
FLKQEATLSARVVAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG
DELPGTMHPCEGMIGQHVGIQNQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAE
TEAINVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHN
KWDQTIATLAALCAKHSVDLIAIGNGTASRETDKLAADLIKKYPAMRMTKVMVSEAGASV
YSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVNHRDEHGAFKTRAALKKVARL
GEKTFEQAAGFLRVMNGDNPLDASAVHPEAYPLVQRIAADTARDIRSLIGDSGFLKRLDP
SKFTDETFGLPTVTDILLELDKPGRDPRPEFKTAEFQEGVEDLKDLQLGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKIDGARGARPGAAPRASQGNAPRKETTAAAPTNNAMASLFANAKQLKKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcattgccgaggaactcggtgtacgcccacaacaggtcgaa
gcggccgtagccctattggatgaaggctccaccgtgcccttcatcgcccgttaccgtaaa
gaagtcaccggcagcctcgatgacacccaactgcgtcatctggaagagcgcctgcgctac
ctgcgcgagctggacgatcgccgcaccagcatcctggccagcatcgaggagcagggcaaa
ctgactccggaactggcccgcgagatcaagctggccgacaccaagacccgcctcgaagac
ctctacctgccgtacaagcaaaaacgccgcaccaagggccagatcgccctggaagccggc
ctgggcgaactggccgacggcctgttcaacgacccgagcctgactccggaagccgaagcc
gcgcgcttcgtcgatggggaaaaaggcgtggccgacatcaaggccgccctggaaggcgcc
aagtacatcctcatggagcgctttgccgaagacgccagcctgctggacaagctgcgcacc
ttcctcaagcaggaagccaccctcagcgcccgcgtggtggctggcaaggaagaagaaggc
gcgaagttccgcgactacttcgaacatgacgaaccgctcaagagcatgccgtcgcaccgc
gccctggcgatcttccgcgggcgcaacgaaggcatcctcagctccgcgctgaaggtcggc
gacgagctaccaggcaccatgcacccctgcgaaggcatgatcggccagcatgtgggcatc
cagaaccagaaccgcccggccgacaagtggctcggcgaagtggtgcgctggacctggaag
gtcaagctctacacccacctggagaccgacctcttgggcgagctgcgcgacggcgccgag
accgaggcgatcaacgtcttcgcccacaacctgcacgacttgctgctggccgccccggcc
ggcccgcgcgccaccctgggcctggacccgggcctgcgcaccggctgcaaggtggcggta
gtggatgccaccggcaagctgctggaccacgccaccgtctacccccacgtaccgcacaac
aagtgggaccagaccatcgccacccttgccgccctgtgcgccaagcactcggtggacctg
atcgccatcggcaacggcaccgccagccgcgagaccgacaagctggccgccgacctgatc
aagaaatacccagccatgcgcatgaccaaggtcatggtctccgaagctggcgcctcggtg
tactcggcctcggagctggcggccaaggagttcccggacctggacgtgtcgatccgtggc
gcggtgtccatcgcccgtcgcctgcaggacccgctggccgaactggtgaagatcgatccg
aagtccatcggtgtcggccagtaccagcacgacgtgtcgcagctgaaactggcccgtggc
ctggacgcggtagtggaagactgcgtgaacgccgtgggcgtcgacgtcaacactgcctcc
gtggccctgctggcacgcatctccggtctcaacgcgaccctggcgcagaacatcgtcaac
caccgcgacgaacacggggccttcaagacccgcgccgccctgaagaaagtcgcccgcctg
ggtgagaagaccttcgaacaggccgccggcttcctgcgcgtgatgaacggcgacaacccg
ctggacgcctccgcggtgcacccggaagcctatccgctggtgcagcgcatcgccgccgat
accgctcgcgacatccgctcgctgatcggcgacagcggtttcctcaagcgcctcgatcca
tcgaagttcaccgacgagaccttcggcctgcccaccgtcaccgatatcctcctggaactg
gacaagcccggccgcgacccgcgtcccgagttcaagaccgccgagttccaggaaggcgtc
gaagacctcaaggacctgcaactggggatgatcctcgaaggcgtggtgaccaacgtcacc
aacttcggtgccttcgtcgacatcggcgtgcaccaggatggcctggtgcacatctcggcg
ctgtcggagaagttcatcaaggacccgcgtgaagcggtgaaggccggcgacgtggtcaag
gtcaaggtcatggaagtggacatcccacgcaagcgcgtgggcctgtcgatgcgcatgagc
gacaccccgggcgagaaaatcgatggcgctcgcggcgctcgtccgggggcggcaccacgc
gcctcccagggcaatgccccgcgcaaggaaaccaccgctgcggcgccgaccaacaacgcc
atggcctcgctgttcgccaacgccaagcagttgaagaagcgctga
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