Pseudomonas sessilinigenes: C4K39_0729
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Entry
C4K39_0729 CDS
T07575
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psep
Pseudomonas sessilinigenes
Pathway
psep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C4K39_0729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psep03400
]
C4K39_0729
Enzymes [BR:
psep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C4K39_0729
DNA repair and recombination proteins [BR:
psep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C4K39_0729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AZC22427
UniProt:
A0ABX8MQM2
LinkDB
All DBs
Position
797011..800463
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AA seq
1150 aa
AA seq
DB search
MPDASSLNPGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEDDDSGGCGIAAAIDVQLPGSFMWQLYRLVLGRDEIPPKSLLDKAPLTWRLMRLLPEL
IDEPHFEPLQRFLTHDSDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNVRGE
PKALPAANCWQAELWRALLLDVGTEGMAQSRAGVHQRFIERINSLDTTPQGLPPRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQARKTGMPLAL
DPQTLHQHAHPLLAAWGKQGRDYINLLDSHDDPNSYRAAFRDGRIDLFSETRPLSMLQQL
QDDILELRPLDETRELWPEVDLQQDSSIRFHIAHSAQREVEILHDQLLARFSADPELRPR
DVIVMVPDIDSYAPHIRAVFGQLERDDRRFIPYTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFGVDEADLPTLHRWIEGAGIRWGMNAEQRAELGLPEELEQNS
WRFGLRRMLLGYAVGRSDACAGIEPYDEIGGLDAALIGPLVALLDALQLAHEQLCQPAVP
GQWGERLHHLLEQFFLASTEHDDYLLGQLEDLRETWLETCESVGLQDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPASVLIGQLRDHLASGWRALD
TPGALLEEMTQEHPLQPFSARYFHDDDPLFSYAREWQVLHQAPQEQDTLVRLEPYAQDEP
LSVAQLQDFLRHPVRHFFSQRLKVFFEAMEAPLADEEPFVLDALQRYNLSDSLLEAALGD
ARQPEHALQAQAQRLQASGLLPMAGFGECLQRELMEPLPDLLQRYQQLLALWPTPLASAL
PVSLDLQGVRVEGWLSGLHQRADNGLLAVTAIANGIGSSKTRKWHRLIKPWINHLLACAS
GYCLTTALVASDDSLLLAPLEQEMARQVLGEILQAWQAGMRQPLPVAVKTAFAWLGQSDP
DKAAAAARKAYDGDGQNSQGERRESPALARQFADYNALIADETFSGWAQTLYRPLLNAPW
RSALGEEAGA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcctcgtccctcaaccctggtttcatggtggttcatggtaaccgcctggac
gagttgcgcagcctggtcgtcagttggatgcggcgctacccgctagcgcccttggagaat
gaaattgccctggttcagagcaatggcattgcccagtggttgaagctggccctggccgaa
gaccccgaagatgatgattccggtggctgcggcatagccgctgccatcgatgtacagttg
cccggcagcttcatgtggcagctgtatcgcctggtgctgggacgggatgaaatcccccca
aaatctctgttggacaaggccccgctcacctggcgcctgatgcgtctattgccggagttg
atcgacgagccgcatttcgagcctctgcaacgtttcctgacccatgacagcgatctgcgc
aaacgctaccaactggccgagcgcttggctgacctgttcgaccaataccaggtataccgg
gccgattggctggaggactgggccgccgggcggcatcagttgcgcaacgttcgaggagag
cccaaggccttgcctgccgccaactgctggcaagccgagttgtggcgagcgctgctcctg
gacgtgggtaccgaaggcatggcccagagtcgagcaggtgtgcaccagcgctttatcgag
cgaatcaacagcctcgacaccaccccccaggggctgccaccgcgagtgatagtgttcggg
atctcgtcactgccggcccaggccctggaggcactggcaggtttggctcgctttagccag
gtactgctttgcgtgcacaacccctgtcgccaccactgggctgacatcgtcgccgacaag
gacctgctgcggcatcagtacaagcgccaggcgcgcaagaccggcatgcccctggcgctc
gatccgcaaaccctgcaccagcatgcacaccccctattggccgcctggggcaagcaaggt
cgtgactacatcaatctcttggacagccacgacgaccccaacagctatcgcgcagccttt
cgcgatggacgtatcgacctgttcagcgagacccgccccctcagcatgctccagcaattg
caggacgacattctcgaactgcgccctctcgatgaaacccgcgagctatggcccgaggtc
gatctccagcaggactcgtcgatccgcttccacattgcccacagtgcccagcgcgaggtg
gagattctccacgatcagctgttggcccgcttcagcgccgatcccgagctgcgccctcgc
gacgtgatcgtcatggttccggatatcgacagttacgctccgcatatacgcgccgtattc
ggccagctggaacgcgatgaccgacgcttcattccctacaccctgaccgaccaggggcaa
cgtggccgcgatccgctgctgatcgccgtggaacacttgctgaaactgccggacagccgc
ttcccggtcagcgagattctcgatctgctggatgtccctgccctgcgcgcacgtttcggt
gtcgacgaagccgacttgccgaccctgcatcgctggatcgaaggtgctggtatccgctgg
ggcatgaatgccgaacagcgagccgaattggggctgcccgaggagctggagcaaaacagc
tggcgtttcggtctgcggcgcatgctgttgggatatgccgttggccgttccgatgcctgc
gccggtatcgagccctatgatgagatcggtggcctggatgccgccctgatcggtccgttg
gtggccttgctcgacgccctgcaactggcccatgagcagctgtgccaacctgccgtgcct
ggccagtggggcgaacgcttgcaccacctgttggagcagttcttcctggccagtaccgag
catgacgattacttgctgggccaactggaagacctgcgcgaaacctggctggaaacctgt
gagtcggtgggcctgcaggatgaactgcctttgaccgtggtacgagaggcctggttagcg
ggcctcgaccaggggcggctgtcccagcgcttcctggccggcgcagtgaacttctgtacc
ctgatgccgatgcgtgccatccccttcaagctggtgtgcctgctgggcatgaacgatggc
gactacccgcgggcccagccccccctggacttcgacctgatgggcagcgactaccgcccg
ggcgaccgctctcggcgtgaagacgaccgctacctgctgctcgaagccttgctctcggcg
cgtgaccagctctacatcagctgggtcggccgcagcatccgtgacaatagcgagcgcccg
gcctccgtgctgatcggccagttgcgcgatcacctggccagtggctggcgagcgctggat
acacctggcgccctactggaagaaatgacccaggagcatccgctgcaacccttcagtgcc
cgctactttcatgacgacgatccgctgttcagctacgcccgggagtggcaagtgctgcat
caggccccacaggagcaggacacgcttgtgcgcctggagccctatgcccaggacgagccc
ctgagtgtggcccagttgcaagatttcctgcgccacccggtacggcatttcttcagccag
cggctcaaggtgttcttcgaagcgatggaggcgcccttggccgatgaagaacccttcgtc
cttgatgccctgcaacgctacaacctgagcgacagcttgctggaggctgcactgggcgac
gcccggcaacccgagcatgcgctacaggctcaggcccagcgactgcaggccagcggcttg
ctgcccatggccggtttcggtgagtgcctgcaacgggagttgatggaacccctgccggac
ttgttgcagcgctaccagcaattgctggccctatggccaaccccgcttgccagcgcactg
ccggtgagcctggacttgcaaggtgtccgagtggaggggtggttaagcggtttgcaccag
cgtgcggataatgggctgttggccgtgaccgccattgccaatggcatcggctccagcaag
acccgcaagtggcaccgactgatcaaaccctggatcaatcacttgctggcctgtgccagt
ggctactgcctgaccacggcactggtggcgagcgacgacagcctgctgctcgccccgctc
gagcaagagatggcccgccaggtcctgggcgagatcttgcaagcctggcaggcgggcatg
cgccaacccctgcccgtggccgtcaagacggcctttgcctggttggggcagagcgatccg
gacaaggccgccgccgcggcgcgcaaggcctatgacggtgatgggcagaatagccagggc
gagcgccgcgaaagtccggcgctggcccgccagtttgccgactacaacgcattgatcgcc
gatgaaaccttcagcggctgggcccaaacgctctatcgcccgctactcaacgccccatgg
cgttcagccctcggcgaggaggccggagcatga
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