Pseudomonas sessilinigenes: C4K39_0731
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Entry
C4K39_0731 CDS
T07575
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psep
Pseudomonas sessilinigenes
Pathway
psep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C4K39_0731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psep03400
]
C4K39_0731
Enzymes [BR:
psep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C4K39_0731
DNA repair and recombination proteins [BR:
psep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C4K39_0731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
SH3_13
NAT10_TcmA_helicase
AAA_22
Viral_helicase1
UvrD-helicase
SLFN-g3_helicase
AAA_28
AAA_16
AAA_5
NTPase_1
AAA_25
nSTAND3
T2SSE
PhoH
DEAD
Motif
Other DBs
NCBI-ProteinID:
AZC22429
UniProt:
A0ABX8MTP5
LinkDB
All DBs
Position
804146..806227
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AA seq
693 aa
AA seq
DB search
MTPDLFASLDEPEPASQGQAPLSRAADLLQLLDLWVARGWLRALDKAFVAFLHELDPECD
PLVLMAAALSSHQLGHGHVCLDLFETLKEPDFALSLPPEGDAQNGAPALPSQVLAGLEGA
HWCKVLAGSRLVALAADHGEGARQRPLVLSGKRLYLRRYWAYERRIDNALRQRLAQTEVT
PEHLARRLDELFGAARASGPVDWQKLACALATRGAFSIITGGPGTGKTTTVVRLLALLQG
PAVEARKPLRIRLAAPTGKAAARLTESISLQVRSLSVADEVREKIPSEVTTVHRLLGNRP
GTRHFRHHAGNRLPLDVLVVDEASMIDLEMMANLLDALPIHARLVLLGDKDQLASVEAGA
VLGDLCRDAEAGWYNPQTRAWLETVSGEDLATSGLQEDHGHQHPLAQQVVMLRHSRRFGE
GSGIGQLARWVNQQQADEARRLLAARSHGDLHGLSLKGEQDRALERLLLEGHGEGPQGYR
HYLNVLRSQRPPVGTGLEDRRWTDWARNVLQAFDRFQLLCAVRKGPWGVESLNQRITQAL
FKARLIESDQQWYEGRPVLMTRNDYGLGLMNGDIGIALRLPEQDGSEAGRQVLRVAFPRN
DGQGGVRLVLPSRLNDVETVYAMTVHKSQGSEFAHTALILPDALNPVLTKELIYTGITRA
KDWFSLIEPRAGVFEEAVRRRVKRLSGLMLELD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggatctgttcgcctccctggacgagccggagccggcctcccagggccaggcc
cccttgagccgtgccgctgacctgctgcagttgctcgacctatgggtggcacggggttgg
ctgcgggccctggacaaggccttcgtggccttcctccatgaactggacccggagtgcgac
ccattggtgctgatggccgcggccctgagcagtcatcaactggggcacggacatgtctgc
ctggacctgttcgaaaccctcaaggagccggacttcgccctgtcattgccccccgaaggg
gacgcgcagaatggcgcgccggcgctgccttcccaagtcctggccggccttgagggcgca
cactggtgcaaggtcctggccggtagccgattggtcgccctggctgcggaccacggcgag
ggtgcgcggcagcggcccctggttctgtcgggcaagcgcctgtacctgcggcgctattgg
gcctatgagcgacgcatagacaacgccctgcgccagcgcctggcacaaaccgaggtaacc
cccgagcatctggcccggcgccttgacgagttgttcggcgcagccagggccagtggtccg
gtcgactggcagaaactcgcctgtgccctggccacgcgaggggccttcagcatcatcacc
ggaggcccgggcaccggcaagaccaccacggtggtccgcctgctggccctgctccagggg
ccggcagtggaggctcgcaagcccctgcgcatccgcctggcagcccccaccggcaaggcc
gcggcgcggttgacggagtcgatcagcctgcaggtgcgctccttgtcggtggccgatgag
gtgcgggaaaagatccccagcgaagtgaccaccgtgcaccgcctgctgggcaatcgcccg
gggacccggcactttcgccaccatgctggcaatcgcctgccactggatgtgctggtcgtg
gacgaggcctcgatgatcgatctggaaatgatggccaacctgctcgatgccttgcccatc
catgcacgcctggtgctgctgggggacaaggaccagttggcctcggtggaggctggagcc
gtgctgggtgacttgtgccgggatgccgaggcgggctggtacaacccgcagacccgcgcc
tggctcgagacggtcagtggtgaagacctggccaccagtggcctgcaggaagatcacggg
caccagcaccccctggcgcagcaggtggtgatgctgcgtcactcccggcgctttggcgaa
ggcagtggcatcggccagctggcacgctgggtcaatcagcaacaggccgacgaggcccgg
cgcttgctggcggcccgcagccatggggacttgcatggcctgagcctcaagggtgaacag
gaccgggccctggagcggctgttgctcgaaggccacggcgaagggccccaaggctatcgc
cattacctgaatgtgctgcgcagccagcgtccaccggttggtaccggcctggaagaccgg
cgttggaccgattgggcacgcaacgtcctgcaggccttcgaccgcttccagctgctctgt
gcggtacgcaaggggccttggggcgtcgagagcctgaaccagcgcatcacccaggcactg
ttcaaggcccggctgatcgaaagcgaccagcaatggtacgagggccgtccggtcttgatg
acccgcaatgactatggcctgggcctgatgaatggtgatatcggcattgccctgcgcttg
ccggaacaggacggcagcgaggcgggccgccaggtgctgcgcgtggccttcccgcgcaac
gatggccagggcggcgtgcgcctggtgctgccgagccggctcaacgacgtggaaaccgtc
tacgccatgactgtgcacaagtcccagggctcggagttcgcccataccgcgctgatcctg
cccgatgcattgaatccggtactgaccaaggagttgatctacaccggcatcacccgggcc
aaggattggttcagcctgatcgaaccccgtgccggtgtcttcgaggaggcggtgcgacgg
cgggtcaagcgcctgagcggattgatgctggagctggactga
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