Pseudomonas sessilinigenes: C4K39_0842
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Entry
C4K39_0842 CDS
T07575
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psep
Pseudomonas sessilinigenes
Pathway
psep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C4K39_0842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psep03019
]
C4K39_0842
03016 Transfer RNA biogenesis [BR:
psep03016
]
C4K39_0842
Enzymes [BR:
psep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C4K39_0842
Messenger RNA biogenesis [BR:
psep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C4K39_0842
Transfer RNA biogenesis [BR:
psep03016
]
Prokaryotic type
tRNA degradation factors
C4K39_0842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
TraK_C
OB_RRP5_4th
KH_PNO1_2nd
S1_2
Motif
Other DBs
NCBI-ProteinID:
AZC22538
UniProt:
A0ABX8MRQ9
LinkDB
All DBs
Position
915666..917771
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AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLAASSLDMVV
AGTEEAVLMVESEAKELTEDQMLGAVLFAHDEFQSVIKAVKELAAEAAKPTWDWAPAAEA
TELLGAIRAEFGDAISQAYTITVKADRYARLGELKDQVVAKLSGEEGQPSASDVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLAKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPDTD
SFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
VIGQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaaattccagttcggtcagtcgaccgtcactctcgagactggc
cgtatcgcccgtcaggcctccggcgcagtattggtcaccgttgacgacgacgtcagcgta
ttggtgaccgtagtcggtgccaagcaagccgatccaggcaaaggcttcttccctctgtct
gtccactaccaggaaaaaacctacgccgccggcaagatccctggtggtttcttcaagcgt
gaaggccgtccttccgagaaagaaaccctgacctcgcgtctgatcgaccgcccgatccgc
cctctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtggtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctctgctgccctggccatc
tccggcattcctttcgacggcccgatcggcgctgcccgcgtcgctttccacgaaagcacc
ggctacctgctgaacccaacctacgagcaactggctgcttcgagcctggacatggtcgta
gccggtaccgaagaagcggtactgatggttgagtccgaagccaaggaactgaccgaagac
cagatgctgggcgccgtgctgttcgcccacgacgaattccaatcggtgatcaaggccgtc
aaggaactggccgccgaagccgccaagccaacttgggactgggcgcctgccgccgaagcc
accgagctgctgggtgccatccgcgccgagttcggcgacgccatctcccaggcctacacc
atcaccgtcaaggccgaccgttatgcccgcctgggcgagctgaaggaccaagtggtcgcc
aagctctccggcgaagaaggccagccatcggcttccgacgtcaaggccgctttcggtgag
atcgaataccgcaccgttcgcgaaaacatcgttaacggcaagccacgtatcgacggccgc
gacactcgtaccgtacgtcctctgaatatcgaagttggcgtcctggccaagacccacggt
tcggccctgttcacccgtggcgaaacccaggccctggtcgttgcgaccctgggtactgcc
cgtgacgcacagctgctggacaccctggaaggcgagaagaaagaccccttcatgctgcac
tacaacttcccaccgttctcggtaggcgaatgtggtcgcatgggtggtgctggtcgtcgt
gaaatcggtcacggccgcctggcccgtcgttccgtccaggccatgctgccggacaccgac
tcgttcccttacaccatccgcgtagtatcggaaatcaccgaatccaacggctccagctcc
atggcttcggtctgcggtgcttccctggccctgatggacgccggtgtaccgatgaaggct
ccggttgccggtatcgccatgggtctggtgaaggaaggcgagaagttcgccgtcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaagtagccggtaccgcc
aagggtgtgaccgcgctgcagatggacatcaagatcaagggcatcaccgaagaaatcatg
gagatcgccctgggccaggccctggaagctcgcctgaacatcctcggccagatgaaccaa
gtgatcggccagtcgcgtaccgagctgtcggccaatgctccgaccatgatcgcgatgaag
atcgacaccgacaagatccgtgacgtcatcggtaaaggcggcgccaccatccgtgcgatc
tgcgaagaaaccaaggcttcgatcgatatcgaagacgacggttcgatcaagatcttcggc
gaaaccaaggaagcggcagaggcagctcgccaacgcgtcctgggcatcaccgcagaggcc
gagatcggcaagatctacgtcggcaaggttgagcgcatcgtcgacttcggcgccttcgtc
aacatcctgccgggcaaggacggcctggtgcacatctccatgctgagcgacgctcgcgta
gagaaagtcaccgacatcctgaaagaaggccaggaagtggaagtgctggtactggacgtg
gacaaccgcggccgtatcaagctgtccatcaaggacgtggcagcagccaaggcttcgggc
gtttaa
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