Pseudomonas sessilinigenes: C4K39_1055
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Entry
C4K39_1055 CDS
T07575
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
psep
Pseudomonas sessilinigenes
Pathway
psep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C4K39_1055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psep03019
]
C4K39_1055
Enzymes [BR:
psep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C4K39_1055
Messenger RNA biogenesis [BR:
psep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C4K39_1055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AZC22750
LinkDB
All DBs
Position
complement(1137187..1138509)
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AA seq
440 aa
AA seq
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MTTPAAPSTPKAPRAEKPKAEQRRPRAPKPPVSTWKLEDFVVEPQEGKTRFHDFKLTPEL
MHAIHDLGFPYCTPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKER
YMGEPRALVIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQLEARHCDILV
ATPGRLLDFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSA
TFTDDVMNLAKQWTTDPAIVEIEAENVANANVEQHIYAVAGADKYKLLYNLVNDNGWERV
MVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRG
IHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPAIEELLGRKI
SCEMPPTELLRAVERKRPQA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacaccggccgccccttccactcccaaggcgccgcgcgcggaaaaacccaaggcc
gagcagcgtcgtccacgcgccccaaaaccgccggtgagcacctggaagctggaagacttc
gtggtcgagccccaggaaggcaagacccgcttccacgacttcaagctcaccccggaactg
atgcacgccatccacgacctgggtttcccctactgcacgccgatccaggcccaggtactg
ggcttcaccctggcgggcaaggacgccatcggtcgcgcccagaccggcaccggcaagacc
gccgcgttcctgatctcgatcatcacccagctgctgcagaccccgccgcccaaggaacgc
tacatgggcgagccgcgggcgctggtcatcgcgccgacccgggaactggtggtgcagatc
gccaaggacgccgcggccctgaccaagtacaccggcctgaacgtgatgaccttcgtcggc
ggcatggacttcgacaagcagctcaagcagctcgaagcccgccactgcgacatcctggta
gccacccctggccgcctgctggacttcaaccagcgcggcgacgtgcacctggacatggtc
gaggtgatggtgctggacgaagccgaccgcatgctcgacatgggcttcatcccccaggtg
cggcagatcatccgccagaccccgcccaagagcgaacgccagaccctgctgttctccgcc
accttcaccgacgacgtgatgaacctggccaagcagtggaccaccgacccggcgatcgtc
gagatcgaagccgagaacgtcgccaacgccaacgtcgagcagcacatctacgccgtggcc
ggtgccgacaagtacaagctgctgtacaacctggtcaacgacaacggctgggagcgggtg
atggtcttcgccaaccgcaaggatgaagtgcggcgcatcgaggaacgcctggtgcgtgac
ggcgtcaacgccgcccagctctccggcgacgtgccgcagcacaaaaggatcaagaccctg
gaaggcttccgcgaaggcaagatccgggtcctggtggccactgacgtcgccggccgcggc
atccacatcgacggcatcagccacgtgatcaacttcaccctgccggaagtccccgacgac
tacgtgcaccgcatcggccggaccggccgggccggcgccgatggcgtatccatcagcttc
gccggcgaagacgactcctaccagctgccagcgatcgaagagctgctggggcgcaagatc
agttgcgaaatgccgcccaccgagctgctgcgcgccgtggagcgcaagcgcccgcaagcc
tga
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