KEGG   Pseudomonas sessilinigenes: C4K39_2093
Entry
C4K39_2093        CDS       T07575                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
psep  Pseudomonas sessilinigenes
Pathway
psep03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C4K39_2093
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psep03400]
    C4K39_2093
DNA repair and recombination proteins [BR:psep03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C4K39_2093
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      C4K39_2093
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_22 AAA_30 HAMP Cauli_AT Viral_helicase1
Other DBs
NCBI-ProteinID: AZC23776
UniProt: A0ABX8MVW1
LinkDB
Position
2174588..2176603
AA seq 671 aa
MSEFQLVTRFQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIQQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESISAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAIDGIKEELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEGISPQTIFVSATPGNYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEITKRVALQERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGKAILYADNITGSMQRAIGETERRRDKQLAFNLANGITPKGVVKDITDIMEGASV
PGSRSKKRKGMAKAAEENARYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTRDE
ISKLRERLLNV
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgtctgagttccagctcgttacccgtttccaacctgccggcgaccagccggaggccatc
cgcctgatggtcgaaggcatcgaggccggcctggcgcaccagaccctgctcggtgtgacc
ggttcgggcaagaccttcagcattgccaacgtcatccagcaagtgcagcgcccgaccctg
gtactggcgccgaacaagaccctggccgcgcagttgtatggcgagttcaaggcgttcttc
ccgaataacgcagtggaatatttcgtttcctactacgactactaccagcccgaagcctac
gtgccgtcctccgataccttcatcgagaaggacgcctcgatcaacgaccatatcgagcag
atgcgcttgtccgcgaccaaggccctgctggagcgcaaggacgcgatcatcgtcaccacg
gtgtcctgcatctacggcttgggcagccctgagacctacctgaagatggtcttgcacgtc
gatcgcggtgacaagcttgaccagcgggccttgttgcgacgcctggcggacctgcaatac
acccgcaacgacatggatttcgcccgggccactttccgggtgcgtggcgatgtgatcgat
atctacccggcggaatccgatctggaggcgatccgcatcgagctgttcgatgacgaagtg
gaaagcatcagtgccttcgacccgctgaccggcgaggtcatccgcaagctgccgcgcttc
accttctatcccaagagccactacgtgaccccgcgggaaaccctgctggaggccatcgac
gggatcaaggaagagctgcaggaacgcctggagtacctgcgctccaacaacaagctggtg
gaagcccagcgcctggagcagcgcacccgttttgacctggagatgatcctggagctgggt
tattgcaacggtatcgagaactactcgcgctatctgtctgggcgtcccgccggtgcgccg
ccgccaaccctgtatgactacctgccagccgatgccttgctggtgatcgatgaatcccat
gtgagcgtgccccaggtcggcgccatgtataaaggtgaccgttcgcgcaaggaaaccctg
gtggagtatggcttccgcttgccgtcggccctggataaccgaccgatgcgtttcgacgag
tgggagggcatcagcccgcagaccatcttcgtctcggccactcctggcaactatgaggcg
gaacatgccggccgggtggtggagcaggtggtgcgtcccacgggtctggtcgacccccag
gtggaagtgcgtccggcgctgacccaggtggatgacttgctgtcggaaatcaccaagcgc
gtagcccttcaggagcgtgtcctggtgaccaccttgaccaagcgcatggccgaggacctt
accgattacctggccgatcacggcgtccgcgtgcgctacctgcactcggatatcgatacc
gtggagcgtgtggagatcattcgcgacttgcgcctggggaccttcgacgtgctggtgggg
atcaacctgctgcgcgaaggcctggacatgccggaagtgtccctggtggcgattctcgat
gccgacaaggaaggcttcctgcgttccgagcgttcgctgatccagaccatcggtcgcgcc
gcgcgtaacctcaacggcaaggcgatcctctacgccgacaacatcaccggctccatgcag
cgtgctatcggtgagaccgagcgtcgtcgtgacaagcagctggctttcaacctggctaac
ggcattacgccaaagggcgtggtcaaggacatcaccgacatcatggaaggcgccagtgtg
ccgggctcgcgcagcaagaagcgcaagggcatggccaaggctgccgaggagaacgcgcgc
tacgaaaacgaactgcgctcaccgagcgagatcaccaagcgcatccgccagctcgaagag
aaaatgtatcaactggcccgcgacctcgagttcgaggcggcggcgcaaacacgcgacgaa
atcagcaagttgcgcgagcggttgctcaacgtctga

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