Pseudomonas sessilinigenes: C4K39_2116
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Entry
C4K39_2116 CDS
T07575
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
psep
Pseudomonas sessilinigenes
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psep03016
]
C4K39_2116
Enzymes [BR:
psep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
C4K39_2116
Transfer RNA biogenesis [BR:
psep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C4K39_2116
Prokaryotic type
C4K39_2116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AZC23795
LinkDB
All DBs
Position
2199215..2200069
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AA seq
284 aa
AA seq
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MANIDNAAAEMAAAGFSRIALGVEYKGSRYHGWQRQSSGVASVQETLEKALSRVADSPIL
LSCAGRTDAGVHACGQVVHFDTQAIRPMKAWVMGANINLPHDISVAWAQEMPAHFHARFK
AIARRYRYVIYNDQIRPAHLNEEVTWNHRPLDIERMAEAAAFLVGTHDFSAFRAGQCQAK
SPIKEIHHLRVIRHGKMIVLDIRASAFLHHMVRNIAGVLMTIGAGERPVEWAREVLESRA
RRAGGVTAHPFGLYLVQVEYNEEFQLPERYIGPHFLSGFPELDG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaatattgataacgcggctgccgaaatggccgccgcaggcttttctcgaatcgct
ctgggtgttgaatacaaggggtcgcgctaccacggctggcagcgccagtcttcgggtgtg
gccagtgtccaggaaaccctggagaaagccctgtcccgggtggcggattcccccatcctt
ctgtcttgtgcggggcgtaccgatgccggtgtgcatgcctgtgggcaggtggtgcatttc
gatacccaggccattcgcccaatgaaggcctgggtcatgggggccaatatcaacttgccc
catgacatcagtgtcgcctgggcccaggaaatgccggcgcactttcatgcgcgattcaag
gcgattgcccggcgctaccgctatgtgatctacaacgaccagatccgcccggctcacctg
aatgaggaagtcacctggaatcatcgcccgctggatatcgagcggatggccgaggcagcg
gcattcctggtgggtacccatgatttcagtgcgtttcgcgctggccagtgccaggcgaaa
tcgccgatcaaggagattcaccacctgcgtgttatccggcacggcaagatgatcgtgctg
gatattcgtgccagtgcgtttcttcatcatatggtgcgcaacattgctggggtcttgatg
actatcggggccggggagcgcccggtggagtgggcgagggaggtgctggagagccgggct
cgacgcgctggtggcgttacggcccacccatttggcctgtatctggtgcaggtcgaatac
aacgaggagttccagttgcccgagcgatacatcgggccacacttcctcagcgggttcccg
gaacttgacggctga
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