Pseudomonas sessilinigenes: C4K39_3007
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Entry
C4K39_3007 CDS
T07575
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psep
Pseudomonas sessilinigenes
Pathway
psep00061
Fatty acid biosynthesis
psep00071
Fatty acid degradation
psep01100
Metabolic pathways
psep01212
Fatty acid metabolism
psep02024
Quorum sensing
psep04146
Peroxisome
Module
psep_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C4K39_3007
00071 Fatty acid degradation
C4K39_3007
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C4K39_3007
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4K39_3007
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psep01004
]
C4K39_3007
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psep04147
]
C4K39_3007
Enzymes [BR:
psep01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C4K39_3007
Lipid biosynthesis proteins [BR:
psep01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
C4K39_3007
Exosome [BR:
psep04147
]
Exosomal proteins
Exosomal proteins of breast milk
C4K39_3007
Exosomal proteins of breast cancer cells
C4K39_3007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AZC24681
LinkDB
All DBs
Position
3205032..3206735
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AA seq
567 aa
AA seq
DB search
MSVASLQPAERIWLNAYMSGVPSDIEADIDRYPSLREVFLEHVDKYRQRVAYVSIGTEMG
YDLWEKRVFAFAAWLQSKGVKKGDRVALMMPNSLQYPICLFGTLLVGAMVVNVNPLYTAH
ELRHLLKDSGAETVVIFENFAHTLEQAMPGSKLKNIVVASIGDLVGTFKGAALNFVLRHV
QKQVPKFNLPGSIRFPAMMKLAAVLEYRPVELAQDDIAFLQYTGGTTGDAKGAMLTHRNI
LANLMQAKAWVGDQLDENQQETNVTLLPLYHVLSLTVNCLMFMCLGGRNILIANPRDVKR
VQMILRKEKFSGIVGVNTLFNGLLENEEFRGRDFSDLKLAIAGGMATHTAVAQRWKEVTG
VPIVEGYGLTECSPVVSISPIEVARVRESDFSGTIGVPLPSTWVRFMREDGQLADIGEEG
ELQVRGPQVMKGYWQRPEETAKVLDRHGWLSTGDIGVMNEKGFIRLVDRKKDMILVSGFN
VYPNEIEDVVALHPGVAEVAAIGVEDGVTGEKVKIFVVRKDPNLTQEQLLAHCREYLTGY
KVPRYVEFRVEELPKTTVGKVLRRALR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgcaagcctgcaacctgccgagcgtatctggctcaacgcttacatgtcgggt
gtacccagcgatatcgaagccgacatcgaccgttacccgtcgttgcgcgaggtgtttctc
gaacacgtggacaagtatcgacaacgggtggcctatgtcagcatcggcaccgagatgggc
tacgacctgtgggaaaagcgcgtgttcgctttcgccgcctggctgcagtccaagggggtg
aaaaagggcgatcgggtggcgttgatgatgcccaacagcctgcagtacccgatctgcctg
ttcggtacgctgctggtcggcgccatggtggtcaacgtcaacccgctgtacaccgcccat
gagctgcgccatctgctcaaggacagcggcgccgagaccgtggtgatcttcgagaacttc
gcccataccctggaacaggccatgccgggcagcaagttgaagaacatcgtggtggcctcc
atcggcgacctggtgggcaccttcaagggggcggcgctgaatttcgtcctgcgccatgtg
cagaagcaggttcccaagttcaacctgccaggttccattcgcttcccggcgatgatgaag
ctggcggccgtgctggagtaccggccggtggagcttgcgcaggacgacatcgccttcttg
cagtacaccggtggtaccacgggcgatgccaagggcgccatgctcacccaccgcaacatc
ctggccaacctgatgcaggccaaggcctgggtcggcgaccagctggacgagaaccagcag
gaaaccaacgtcaccctgctgccgctgtaccacgtgctgtcgctgacggtgaactgcctg
atgttcatgtgcctgggggggcgcaatatcctgatcgccaacccccgtgacgtgaagcgg
gtgcagatgatcctgcgcaaggaaaagttcagcggcatcgtcggggtcaacaccttgttc
aatggcttgctggagaacgaggaattccgtgggcgcgatttctccgacctgaagctggcg
attgctggtggcatggctacccacaccgccgtggcccagcgttggaaagaggtgacgggg
gtaccgatcgtcgagggttatgggctgaccgaatgctcgccggtggtgagcatcagcccg
atcgaggtcgcccgtgtgcgcgaaagtgatttcagcggcactatcggtgtgccgctgccg
tccacctgggtgcgcttcatgcgcgaggacggccaactggcggacatcggcgaggagggc
gagttgcaggtacgcggcccgcaggtgatgaagggctactggcagcgacccgaggaaacc
gccaaggtcctggaccgccacggctggctctctacgggcgatatcggggtgatgaacgaa
aagggcttcatccgcctggtggaccgcaagaaggacatgatcctggtgtctggcttcaac
gtgtaccccaacgagatcgaggatgtggtggccttgcatcccggggtggcggaagtagcg
gccatcggcgtcgaggatggagtcaccggggagaaggtgaagatcttcgtggtgcgcaag
gacccgaacctcacccaggagcaactgctggcccactgccgggaatacctcaccggctac
aaggtgccgcgctacgttgagttccgtgtcgaagagctgcccaagaccacggtcggcaag
gtcctgcgccgggccctgcgctga
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