Pseudomonas sessilinigenes: C4K39_3650
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Entry
C4K39_3650 CDS
T07575
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psep
Pseudomonas sessilinigenes
Pathway
psep00300
Lysine biosynthesis
psep00470
D-Amino acid metabolism
psep01100
Metabolic pathways
psep01110
Biosynthesis of secondary metabolites
psep01120
Microbial metabolism in diverse environments
psep01230
Biosynthesis of amino acids
Module
psep_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C4K39_3650
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C4K39_3650
Enzymes [BR:
psep01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C4K39_3650
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AZC25318
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All DBs
Position
complement(3903477..3904724)
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALSAIADRFGTPTYVYSRAHIEAQYLAYAEALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGQADKIVFSGVGKTRDDMRRALEVGVH
CFNVESAEELERLQEVAAQMGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED
VYVRAAQLPNLEIVGVDCHIGSQLTSLAPFIDALERLLDLVDRLAECGIYLRHIDLGGGL
GVRYRDEEPPLAADYIKAVRERLAGRDLALVFEPGRFIVANAGVLLTRVEYLKHTEHKDF
AIVDGAMNDLIRPALYQAWMDVSAVRPRDTEPRTYDIVGPICETGDFLAKERALALAEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQAVQVRRRETLAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcaactaccgcgacggcgagctgttcgcggaaggcgtagccctgtccgcc
attgccgatcgtttcggtacgcccacctacgtctattcccgcgcgcacatcgaggcccag
tacctggcctacgccgaggcgttggccggcatgccgcacctggtctgcttcgcggtgaag
gccaactccaaccttggcgtactcaatgtcctggcgcgcctgggcgccggtttcgacatc
gtctcccgaggtgagctggaacgggtgctggccgcgggcgggcaagcggacaagattgtc
ttctccggcgttggcaagacccgcgacgacatgcgccgcgccctggaagtcggcgtccat
tgcttcaacgtcgaatctgccgaagaactggagcgcctgcaggaagtggcagcgcagatg
ggcgtacgtgcaccggtatccctgcgggtcaatcccgatgtggatgcaggcactcacccc
tacatttccaccgggctcaaggaaaacaagttcggcattgccattgctgccgccgaggat
gtgtatgttcgcgcggcccagctgcccaacctggaaatcgtcggtgtcgattgccacatc
ggctcgcaactgaccagcctggcgcccttcatcgatgccctcgaacgcctgctggacctg
gtagaccgcctcgccgagtgcggcatctacttgcgccacattgacctgggcggaggcctg
ggagtgcggtatcgcgacgaggaaccacccctggcagccgactacatcaaggccgtgcgt
gagcgcctggccgggcgcgacctggccctggtgttcgagcccggacgcttcatcgtcgcc
aatgccggggtgttgctgactcgggtcgagtacctcaagcacaccgaacacaaggacttc
gccatcgtcgacggcgccatgaacgacctgatccgtccggcgctgtaccaggcctggatg
gatgtcagtgccgtgcgcccacgagataccgaaccccgaacctacgacatcgtcggccca
atctgtgaaaccggcgatttcctcgccaaggagcgcgccctggccctggccgagggcgac
ctgctggcggtgcattcagccggtgcctatggttttgtcatgagttcgaactacaacacc
cgcggccgcgccgccgaagtcctggtcgatggtgaccaggctgtgcaagtgcgccgtcgc
gagacgctagccgagttattcgctggcgaaagcctgttgccggagtaa
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