KEGG   Pseudomonas sessilinigenes: C4K39_3650
Entry
C4K39_3650        CDS       T07575                                 
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
psep  Pseudomonas sessilinigenes
Pathway
psep00300  Lysine biosynthesis
psep00470  D-Amino acid metabolism
psep01100  Metabolic pathways
psep01110  Biosynthesis of secondary metabolites
psep01120  Microbial metabolism in diverse environments
psep01230  Biosynthesis of amino acids
Module
psep_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psep00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    C4K39_3650
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    C4K39_3650
Enzymes [BR:psep01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     C4K39_3650
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AZC25318
LinkDB
Position
complement(3903477..3904724)
AA seq 415 aa
MDAFNYRDGELFAEGVALSAIADRFGTPTYVYSRAHIEAQYLAYAEALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGQADKIVFSGVGKTRDDMRRALEVGVH
CFNVESAEELERLQEVAAQMGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIAAAED
VYVRAAQLPNLEIVGVDCHIGSQLTSLAPFIDALERLLDLVDRLAECGIYLRHIDLGGGL
GVRYRDEEPPLAADYIKAVRERLAGRDLALVFEPGRFIVANAGVLLTRVEYLKHTEHKDF
AIVDGAMNDLIRPALYQAWMDVSAVRPRDTEPRTYDIVGPICETGDFLAKERALALAEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQAVQVRRRETLAELFAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgctttcaactaccgcgacggcgagctgttcgcggaaggcgtagccctgtccgcc
attgccgatcgtttcggtacgcccacctacgtctattcccgcgcgcacatcgaggcccag
tacctggcctacgccgaggcgttggccggcatgccgcacctggtctgcttcgcggtgaag
gccaactccaaccttggcgtactcaatgtcctggcgcgcctgggcgccggtttcgacatc
gtctcccgaggtgagctggaacgggtgctggccgcgggcgggcaagcggacaagattgtc
ttctccggcgttggcaagacccgcgacgacatgcgccgcgccctggaagtcggcgtccat
tgcttcaacgtcgaatctgccgaagaactggagcgcctgcaggaagtggcagcgcagatg
ggcgtacgtgcaccggtatccctgcgggtcaatcccgatgtggatgcaggcactcacccc
tacatttccaccgggctcaaggaaaacaagttcggcattgccattgctgccgccgaggat
gtgtatgttcgcgcggcccagctgcccaacctggaaatcgtcggtgtcgattgccacatc
ggctcgcaactgaccagcctggcgcccttcatcgatgccctcgaacgcctgctggacctg
gtagaccgcctcgccgagtgcggcatctacttgcgccacattgacctgggcggaggcctg
ggagtgcggtatcgcgacgaggaaccacccctggcagccgactacatcaaggccgtgcgt
gagcgcctggccgggcgcgacctggccctggtgttcgagcccggacgcttcatcgtcgcc
aatgccggggtgttgctgactcgggtcgagtacctcaagcacaccgaacacaaggacttc
gccatcgtcgacggcgccatgaacgacctgatccgtccggcgctgtaccaggcctggatg
gatgtcagtgccgtgcgcccacgagataccgaaccccgaacctacgacatcgtcggccca
atctgtgaaaccggcgatttcctcgccaaggagcgcgccctggccctggccgagggcgac
ctgctggcggtgcattcagccggtgcctatggttttgtcatgagttcgaactacaacacc
cgcggccgcgccgccgaagtcctggtcgatggtgaccaggctgtgcaagtgcgccgtcgc
gagacgctagccgagttattcgctggcgaaagcctgttgccggagtaa

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