Pseudomonas sessilinigenes: C4K39_3915
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Entry
C4K39_3915 CDS
T07575
Name
(GenBank) Carnitine operon transcriptional regulator
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
psep
Pseudomonas sessilinigenes
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psep03000
]
C4K39_3915
Transcription factors [BR:
psep03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C4K39_3915
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AZC25583
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All DBs
Position
4176936..4177883
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AA seq
315 aa
AA seq
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MSQDFYFLLLPGFSAIGFISAIEPLRVANRFRGGLYRWHVLSVDGGAVLASNGMSVNADA
ALEPLKKGTTLLVVAGFEPLRSFGAALEHWLRRLDGDGVTLGGIDTGSVVLAEAGLLEGH
RVALHWEAIDAFKESYPQLSVTQELFEIDRRRISSAGGTASIDMMLDLIGQAHGPQLAIQ
VSEQFVLGRIRPRKDHQRMEVASRYGINNKKLVQVIGEMEQHSEPPLSTLALAESVNITR
RQLERLFRLHLNDTPSNFYLGLRLDKARQLLRQSDLSVLEVSIACGFESPSYFTRSYRAR
FTRCPREDRQHSQKA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggatttctacttcttgctgctgccggggttctcggccatcggcttcatctcg
gccatcgagcctttgcgggtggccaaccgctttcgcggcgggctgtatcgctggcatgta
ttgagtgtggatggcggggcggtgctggccagcaacggcatgtcggtcaacgccgatgcc
gcgctggagccgctgaagaagggcaccaccttgctggtggtggccgggttcgagccgctg
cgctccttcggagcggccctggagcactggctgcggcgcctggatggggacggggtgacc
ctgggcgggatcgacaccggtagcgtggtgctggccgaggccggcctgctggaagggcac
cgggtggccctgcactgggaagcgatcgacgccttcaaggagtcttatccacagctgagc
gtcacccaggaactgttcgagatcgaccggcggcgcatcagctcggccggtggcacggcg
tccatcgacatgatgctcgacctgatcggccaggcccacggcccgcagctggcgatccag
gtcagcgagcagttcgtgctggggcgcatccgtccgcgcaaggaccaccagcgcatggag
gtcgccagccgctacggcatcaacaacaagaaactggtgcaggtgatcggcgagatggag
cagcacagcgagccgcccctgagcaccctggccctggccgagtcggtcaacatcacccga
cgccagttggagcgcctgtttcgcctgcacctcaacgacacgccgagcaatttctacctc
gggctgcgcctggacaaggcccgccagctattgcgccagagcgacctgagcgtgctggaa
gtgagcatcgcctgcggtttcgaatcgccgtcctatttcacccgcagctaccgcgcgcgg
ttcactcgctgcccacgggaggatcggcaacacagccagaaggcctga
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