Pseudomonas sessilinigenes: C4K39_3937
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Entry
C4K39_3937 CDS
T07575
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psep
Pseudomonas sessilinigenes
Pathway
psep00260
Glycine, serine and threonine metabolism
psep00460
Cyanoamino acid metabolism
psep00630
Glyoxylate and dicarboxylate metabolism
psep00670
One carbon pool by folate
psep00680
Methane metabolism
psep01100
Metabolic pathways
psep01110
Biosynthesis of secondary metabolites
psep01120
Microbial metabolism in diverse environments
psep01200
Carbon metabolism
psep01230
Biosynthesis of amino acids
psep01240
Biosynthesis of cofactors
psep04981
Folate transport and metabolism
Module
psep_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C4K39_3937
09102 Energy metabolism
00680 Methane metabolism
C4K39_3937
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C4K39_3937
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
C4K39_3937
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
C4K39_3937
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
C4K39_3937
Enzymes [BR:
psep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
C4K39_3937
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AZC25605
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Position
4204660..4205913
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDALLAAINAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTNTGLIDYDEVERLAVEHQPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKAYQKQVIDNAQAMAG
VFVKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCTELAGWICDILDHLGDADVEANVARQVTTLCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggctacgacgatgcactgctggcggcgatcaat
gccgaggagcagcgccaggaagaccacatcgagctgattgcgtcggagaactacaccagc
aagcgagtgatgcaggcccagggcagcggcttgaccaacaagtacgccgaagggtacccg
ggcaagcgctactacggcggttgtgagcatgtggacaaggtcgaggccctggccatcgag
agggccaagcagttgttcggtgccgactacgccaacgttcagccgcattccggttcgtcg
gccaacagcgccgtgtacctggccttgctgcaggctggcgacaccatcctcggcatgagc
ctggcccacggcgggcacttgacccacggggccaaggtgtcgtcctcgggcaagctgtac
aacgcggtgcaatacgggatcgacaccaacaccgggctgatcgactacgacgaggtcgag
cgcctggccgtggagcaccagccgaagatgatcgtcgccggcttctcggcctattccaag
accctggatttcccgcgcttccggcagatcgccgacaaggtcggggcgctgctgttcgtc
gacatggcccacgttgccgggctggtggcggccggcttgtaccccaacccgatcccgttc
gccgacgtggtcaccaccaccacccacaagaccctgcgcggtccccgtggcgggctgatc
ctggccaaggccaacgaagagatcgagaagaagctcaacgccgcggtgttccccggcgcc
cagggcggcccgctgatgcatgtgatcgcggccaaggcggtgtgtttcaaagaggccctg
gagcctggcttcaaggcctaccagaagcaggtgatcgacaacgcccaggccatggccggc
gtgttcgtcaaacgtggctacgatgtagtgtccggcggcaccgataaccatctgttcctg
gtcagcctgatccgccagggcctgaccggcaaggatgccgatgccgccctgggccgcgcc
catatcaccgtgaacaagaacgccgtgcccaacgacccgcagtcgccgttcgtcacctcc
ggcctgcgcatcggtaccccggcggtcaccacccgtggcttcaaggtcgcccagtgcacc
gagctggccggctggatctgcgacattctcgatcacctcggcgatgccgatgtcgaggcc
aatgtcgcccgccaggtgacgaccctgtgcgccgatttcccggtctaccgctga
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