Pseudomonas sessilinigenes: C4K39_3973
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Entry
C4K39_3973 CDS
T07575
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psep
Pseudomonas sessilinigenes
Pathway
psep02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4K39_3973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psep03021
]
C4K39_3973
Transcription machinery [BR:
psep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C4K39_3973
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
Rv2175c_wHTH
HTH_17
HTH_24
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AZC25641
UniProt:
A0ABX8MLT1
LinkDB
All DBs
Position
complement(4240533..4241051)
Genome browser
AA seq
172 aa
AA seq
DB search
MSSVQSPRNELVDTLYRDHRGWLLAWLRRNVACAQRAEDLSQDTFVRLLGRDELKAPREP
RAFLAAIAKGLLFDHFRRAALEQAYLNELLLIPEAEQPSPEEQQMILEDLKTIDRLLDKL
SSKARAAFLYNRLDGLGHAEIATRLGVSVPRVRQYLAQGIRQCYIALYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtcagtccaaagtccccgcaatgagctggttgataccctgtatcgcgaccatcgt
ggctggctgctggcctggctacggcgcaacgtggcctgtgcacaacgggccgaagacctg
agccaggacaccttcgtgcgcctgctggggcgcgatgaactcaaggccccccgtgagccc
cgggccttcctggcggccatcgccaagggcctgctgttcgatcatttccgccgtgccgcc
ctggagcaggcctacctcaacgagttgctgctgatccccgaggccgaacaaccctcgccg
gaagaacagcaaatgatcctcgaagacctcaagactatcgaccgcctgctcgataaactg
tcgagcaaggcccgcgcggcctttctctacaaccgcctcgatggcctgggccacgccgag
atcgccacccgcctgggggtctccgtaccccgggtccgccagtacctggcccagggcatc
cgccaatgctacatcgccctctacggggagccgacatga
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