Pseudomonas sessilinigenes: C4K39_3974
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Entry
C4K39_3974 CDS
T07575
Name
(GenBank) Exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psep
Pseudomonas sessilinigenes
Pathway
psep03030
DNA replication
psep03430
Mismatch repair
psep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4K39_3974
03430 Mismatch repair
C4K39_3974
03440 Homologous recombination
C4K39_3974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psep03032
]
C4K39_3974
03400 DNA repair and recombination proteins [BR:
psep03400
]
C4K39_3974
Enzymes [BR:
psep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4K39_3974
DNA replication proteins [BR:
psep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C4K39_3974
DNA repair and recombination proteins [BR:
psep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C4K39_3974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AZC25642
UniProt:
A0ABX8MLS7
LinkDB
All DBs
Position
complement(4241201..4241908)
Genome browser
AA seq
235 aa
AA seq
DB search
MSLFNWFRPAASVLDSTQQQRRDRLPAFTPLDERSLREQRWVVVDVETSGLNLNRDQVLS
IGAVVIEDGAIDFSQQFERTLQREGHKLSPSVLIHGLGPSAIAAGSDPLEALLDFMEFVG
DSPLLAFHAPFDQHMLGRALKDSLGYRLQHDFLDVADMAPLLCPQAPIREAGLDDWVDWF
KLQVVERHHAAADALATAELALILFNRAQQQQIHSPLSLQQRLGQWRRRRQAPSF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttcaactggtttcgccctgccgccagcgtcctggacagcacccagcaacag
cgccgcgatcgcctgccggcattcaccccgctggatgagcgcagcctgcgcgaacaacgc
tgggtggtggtggacgtcgagaccagcggcctgaacctcaatcgcgaccaggtgctgtcc
atcggggccgtagtgatcgaggacggggccatcgacttcagccagcagttcgaacgcacc
ctgcagcgcgaggggcacaagctcagccccagcgtactgatccacggcctgggccccagc
gccatcgcggccggcagcgatccgctggaggccctgctggacttcatggagttcgttggc
gacagcccgctgctggccttccacgccccgttcgaccagcacatgcttggccgcgcactg
aaggacagcctgggctaccgcttgcagcacgacttcctcgatgtggcggacatggccccg
ctgctctgcccacaagcgcctatccgcgaggccggcctggatgactgggtcgactggttc
aagctacaggtggtggaacgccaccatgccgcggccgatgccctggccactgccgaactg
gcgctgatcctgttcaaccgcgcgcaacagcaacaaatccacagccccttgagcctgcaa
cagcgcctgggccagtggagacgccgccggcaggctccctccttctag
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