KEGG   Pseudomonas sessilinigenes: C4K39_3974
Entry
C4K39_3974        CDS       T07575                                 
Name
(GenBank) Exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psep  Pseudomonas sessilinigenes
Pathway
psep03030  DNA replication
psep03430  Mismatch repair
psep03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C4K39_3974
   03430 Mismatch repair
    C4K39_3974
   03440 Homologous recombination
    C4K39_3974
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psep03032]
    C4K39_3974
   03400 DNA repair and recombination proteins [BR:psep03400]
    C4K39_3974
Enzymes [BR:psep01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C4K39_3974
DNA replication proteins [BR:psep03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     C4K39_3974
DNA repair and recombination proteins [BR:psep03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     C4K39_3974
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: AZC25642
UniProt: A0ABX8MLS7
LinkDB
Position
complement(4241201..4241908)
AA seq 235 aa
MSLFNWFRPAASVLDSTQQQRRDRLPAFTPLDERSLREQRWVVVDVETSGLNLNRDQVLS
IGAVVIEDGAIDFSQQFERTLQREGHKLSPSVLIHGLGPSAIAAGSDPLEALLDFMEFVG
DSPLLAFHAPFDQHMLGRALKDSLGYRLQHDFLDVADMAPLLCPQAPIREAGLDDWVDWF
KLQVVERHHAAADALATAELALILFNRAQQQQIHSPLSLQQRLGQWRRRRQAPSF
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagcctgttcaactggtttcgccctgccgccagcgtcctggacagcacccagcaacag
cgccgcgatcgcctgccggcattcaccccgctggatgagcgcagcctgcgcgaacaacgc
tgggtggtggtggacgtcgagaccagcggcctgaacctcaatcgcgaccaggtgctgtcc
atcggggccgtagtgatcgaggacggggccatcgacttcagccagcagttcgaacgcacc
ctgcagcgcgaggggcacaagctcagccccagcgtactgatccacggcctgggccccagc
gccatcgcggccggcagcgatccgctggaggccctgctggacttcatggagttcgttggc
gacagcccgctgctggccttccacgccccgttcgaccagcacatgcttggccgcgcactg
aaggacagcctgggctaccgcttgcagcacgacttcctcgatgtggcggacatggccccg
ctgctctgcccacaagcgcctatccgcgaggccggcctggatgactgggtcgactggttc
aagctacaggtggtggaacgccaccatgccgcggccgatgccctggccactgccgaactg
gcgctgatcctgttcaaccgcgcgcaacagcaacaaatccacagccccttgagcctgcaa
cagcgcctgggccagtggagacgccgccggcaggctccctccttctag

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