Pseudomonas sessilinigenes: C4K39_4109
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Entry
C4K39_4109 CDS
T07575
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psep
Pseudomonas sessilinigenes
Pathway
psep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C4K39_4109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psep03021
]
C4K39_4109
03400 DNA repair and recombination proteins [BR:
psep03400
]
C4K39_4109
Enzymes [BR:
psep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C4K39_4109
Transcription machinery [BR:
psep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C4K39_4109
DNA repair and recombination proteins [BR:
psep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C4K39_4109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
AZC25767
LinkDB
All DBs
Position
4375576..4376577
Genome browser
AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
VEIVNPDHVIANLASNGALNMKLVVARGRGYEPADSRQSDEDESRSIGRLQLDSSFSPVR
RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgacaccccgccatattgatgtgcaggttgtcagt
ccaacccgcgccaagatcaccctcgagcctctcgagcgtggttttggccacaccctgggc
aacgcgctgcgccgcatcctgttgtcctcaatgcccggctgtgcagtagtcgaggccgag
attgacggtgtgctccacgagtacagcgccatcgaaggtgtacaggaagacgtaattgaa
atcctgttgaaccttaaaggtctggctatcaagctgcacggccgtgacgaagttacgctg
accttgtcgaagaagggttcgggggtggttaccgctgccgatattcagctggatcatgat
gtcgagatcgttaaccccgatcacgtaatcgctaacctggcgtctaacggcgctctgaac
atgaagctcgtagtagctcgtggtcgtggttatgagccggccgactcgcgtcaaagcgat
gaagacgaaagccgcagcattggtcgcttgcagcttgactcttcgttcagcccggttcgc
cgtatcgcctacgtggtggaaaacgcccgtgtcgagcagcgtaccaacctggacaagctg
gttattgatctggaaaccaacggtaccctggatcctgaagaggctatccgtcgtgctgca
accatcctgcaacagcagttggctgcgttcgtcgacctcaaaggtgacagtgagccagtg
gtagtcgagcaggaagacgagatcgatccgatccttcttcgcccggttgacgatctggaa
ctgactgtacgttcggctaactgccttaaggcggaaaacatttactacatcggcgacctg
attcagcgtaccgaagtagaactgttgaagactccgaacctgggcaagaaatccctgact
gaaatcaaggatgttctggcctcccgcggtctgtccctcggcatgcgcctcgataactgg
ccgcctgcaagtcttaagaaggacgacaaggcgactgcctga
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