Pseudomonas sessilinigenes: C4K39_4181
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Entry
C4K39_4181 CDS
T07575
Name
(GenBank) Nitrogen regulation protein NtrC
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psep
Pseudomonas sessilinigenes
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psep03000
]
C4K39_4181
Transcription factors [BR:
psep03000
]
Prokaryotic type
Helix-turn-helix
Other families
C4K39_4181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
AAA_5
HTH_7
HTH_23
AAA_2
HTH_30
PAS_9
PAS_8
HVO_A0261_N
AAA
HTH_22
HTH_17
Mga
HTH_50
HTH_28
HTH_20
HTH_AraC
Diguanyl_cycl_sensor
IclR_C
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
AZC25839
UniProt:
A0ABX8MLP3
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Position
4461099..4463021
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AA seq
640 aa
AA seq
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MHSSNHLTRHAQQVLTVARGKAHLQGPGSDPSIARSWLRCLEDYHLDPALSMAPTVLEHG
RLLESRERLKDVLQIAGTEMANLHQQLSGAGHAVLLTDARGVILNCITAPSERKIFEHAG
LWLGADWSEAREGTNGIGTCLVERQSLTIHQGEHFRGRHTGLTCSASPVFDPHGELLAVL
DVSSARQDVSRQSQFHTMAMVNLSAKMIESCYFLRYFENQWLLRFHLQAESVGLFSEGLL
AFDGEGRICAVNQSALNLLGHIRGGLLGKPVDSFFECSLDELFGRASLNASASWPLRTRD
GRHLFALLRGAPPAVVQPMLRAPVNVAVPKASGICLGDAGLQGDFRRASRVFERDVPLLI
NGETGSGKEAFAKAVHQASARADKAFVALNCAAIPESLIESELFGYRGGSFTGARKEGMR
GKLQQADGGTLFLDEIGDMPLALQTRLLRVLEDRLVVPIGGEPQSVNVRIISATHRNLLE
RVGDGSFREDLYYRLNGLEIALPALRERSDKSQLLDFLLAEEAGSQPVVLDEAARQNLLA
YSWPGNVRQLRNVLRTLAALCEDGRIGVQDLPPLIRQGNRPIAPSEPLDDQPERPLEDAE
RVALLAALEQQRWHMTHTAEQLGISRNTLYRKLRKHSIAR
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcagtaatcatctcacccgccatgcccagcaagtgctgacggtagcccggggc
aaggctcatctgcaggggcccggcagcgatccttccatcgcccgctcctggttgcgctgc
ctggaggactatcacctcgacccggctctttccatggcccccacggtgctcgagcacggt
cgcctgctggagagccgggagcgcttgaaggatgtcctgcagatcgccggcaccgaaatg
gccaacctgcaccagcagttgtctggcgctggccatgcggtactgctgaccgatgcccgt
ggggtgatcctcaactgcatcaccgctcccagcgagcgcaagatcttcgaacatgccggg
ttgtggctgggggctgactggagcgaggcccgggagggcaccaacggtatcggtacctgc
ctggtcgagcgccagtcgctgacgattcatcagggcgagcattttcgtggccggcacacc
ggcctgacctgttcggccagtccggtgttcgatccccatggcgagttgctggcggtgctg
gatgtgtcgtcggctcgccaggatgtttcccgccagagccagttccacaccatggccatg
gtcaacctctcggcgaagatgatcgagagttgctacttcctgcgttacttcgagaaccag
tggttgctgcgctttcatttgcaggccgaatcggtgggcctgttcagcgaggggctgctg
gccttcgacggcgaaggacggatctgcgcggtgaaccagagtgcgctgaacctgctgggg
catatccgcggcggcctgttgggcaagccggtggacagtttcttcgagtgctccctggac
gagctgttcgggcgcgccagcctgaacgccagtgccagttggccattacgcacccgggat
gggcggcatttgttcgccctgctgcgaggcgcgccacctgccgttgtacaacccatgctg
cgagccccggtgaatgtggcggtgcctaaggcttcgggcatctgccttggcgatgctggc
ctgcaaggcgattttcgccgggcatcgcgggtcttcgagcgcgacgtgccgctgctgatc
aatggtgagaccggctcgggcaaggaggccttcgccaaggccgtgcaccaggccagtgcc
cgggcggacaaggccttcgtcgccctcaactgcgcggccattccggagagcctgatcgag
agcgaactgttcggttatcgcggtggcagtttcaccggggcacgcaaggaaggcatgcgc
ggcaagttgcagcaggccgatggcggtaccttgttcctcgatgaaatcggtgacatgccc
ctggccttgcagactcgtttgctgagggtgctggaggatcgactggtggtgccgattgga
ggcgagccgcaatcggtcaatgtccggatcatcagcgccacccaccgcaacctgctggag
cgagtcggcgacggtagttttcgcgaagacctgtactaccggctcaatggcctggagatt
gccctgccagccttgcgcgagcgcagcgacaagtcccagttgctggattttctcctggcc
gaagaggcgggctcgcaaccggtggtgctggacgaggcggcgcgccagaacctgctggcc
tactcctggccgggtaacgtgcggcaattgcgaaacgtactgcggaccttggcggcgctg
tgcgaggacggtcggatcggtgtgcaggacctgccaccgctgattcgccagggcaaccgc
ccgatagcgcccagcgaacccctcgatgatcagccggagcggcctcttgaggatgccgaa
cgggtggccctgctggcagcgctggagcagcagcgctggcacatgacccacaccgccgag
cagttggggatcagccgcaacaccctgtatagaaagctgcgcaagcacagtatcgcgcgc
tga
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