Pseudomonas sessilinigenes: C4K39_4297
Help
Entry
C4K39_4297 CDS
T07575
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psep
Pseudomonas sessilinigenes
Pathway
psep00260
Glycine, serine and threonine metabolism
psep00460
Cyanoamino acid metabolism
psep00630
Glyoxylate and dicarboxylate metabolism
psep00670
One carbon pool by folate
psep00680
Methane metabolism
psep01100
Metabolic pathways
psep01110
Biosynthesis of secondary metabolites
psep01120
Microbial metabolism in diverse environments
psep01200
Carbon metabolism
psep01230
Biosynthesis of amino acids
psep01240
Biosynthesis of cofactors
psep04981
Folate transport and metabolism
Module
psep_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C4K39_4297
09102 Energy metabolism
00680 Methane metabolism
C4K39_4297
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C4K39_4297
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
C4K39_4297
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
C4K39_4297
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
C4K39_4297
Enzymes [BR:
psep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
C4K39_4297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AZC25955
LinkDB
All DBs
Position
complement(4579998..4581251)
Genome browser
AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLQGGDTILGMS
LAHGGHLTHGAAVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFREIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMAEV
FIERGFDVVSGGTQNHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKETECRELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgcagatctctttgccgccatggag
caagaagctcagcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
ccagcggtgatggaagctcaaggctcggtactgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggcggttgcgaatacgtcgacgtggtcgagcagcttgcaatcgac
agagccaaggagctgttcggcgccgattacgccaacgtccagccccacgccggctcccag
gccaacgccgcggtctacctggccctgctgcaaggcggcgacaccatcctgggcatgagc
ctggcccacggcggccacctgacccacggtgcggccgtttcctcctccggcaagctgtac
aacgctgtccagtacggcatcgatgccaatggcctgatcgactacgacgaagtcgagcgc
ctggccgtcgagcacaagccgaagatgatcgtcgccggtttctccgcctactcgcagatc
ctggacttcccacgtttccgcgaaatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgtggccggtctggtcgccgctggcgtctacccgaacccggtgccattcgcc
gacgtggtgaccaccaccacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gctcgcgccaacgccgacatcgagaagaaactgaactccgccgtattccctggcgcccag
ggcggcccgctggagcacgtgatcgccgccaaggccatctgcttcaaggaagccctgcaa
cctgagttcaaggcctaccagcagcaagtggtgaagaacgcccaggccatggccgaagtg
ttcatcgagcgcggtttcgacgtggtttccggcggtacccagaaccacctgttcctgctg
tcgctgatcaagcaggacatctccggtaaggacgccgacgccgctctgggcaaggccttc
atcaccgtgaacaagaactccgtgccaaacgacccacgctcgccgttcgtcacctcgggc
ctgcgcttcggtactccagccgtgaccacccgtggtttcaaggaaaccgagtgccgcgaa
ctggccggctggatctgcgacatcctggctgacctgaacaacgaagcggtgatcgacgcc
gtacgtgagaaggtcaaggccatctgcaagaagctgccggtatacggcgcctga
DBGET
integrated database retrieval system