KEGG   Pseudomonas sessilinigenes: C4K39_4838
Entry
C4K39_4838        CDS       T07575                                 
Name
(GenBank) Exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
psep  Pseudomonas sessilinigenes
Pathway
psep03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:psep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    C4K39_4838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psep03400]
    C4K39_4838
Enzymes [BR:psep01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     C4K39_4838
DNA repair and recombination proteins [BR:psep03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     C4K39_4838
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     C4K39_4838
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      C4K39_4838
SSDB
Motif
Pfam: ExoI_SH3 ExoI_C RNase_T
Other DBs
NCBI-ProteinID: AZC26484
UniProt: A0ABX8MJI4
LinkDB
Position
5130832..5132280
AA seq 482 aa
MTSLFWYDYETTGINPRNDRPLQVAGIRTDLALNEIDEPVNLYCQLADDILPHPAACMIT
GITAQRLAERGLGEAEFMTRVHEQLARPGTCGVGYNTLRFDDEMTRYSLYRNFFDPYARE
WQGGNSRWDLIDVVRAAYALRPEGIVWPEEQGQVTLKLERLTAANGIDHGQAHDALSDVR
ATIALARLIRDKQPKLYDWLFQLRSKQRVMDQIRLLQPVVHISGRFSAARHYVGVVLPLA
WHPRNRNALIVCDLHLDPQGLLDLDAEALRQRLYTRREELAEGELPVPLKLIHINRCPVV
APLNVLRAEDQQRLHLDMDEYQRRAALLRDAQEVWQDKLSVIYGPDEFAVSEDPEQQLYD
GFIGDRDRRLCEQVRLADPQNLARQQWPFDDERLPELLFRYRARNFTETLSDAEQERWLG
FCRQRLLDPQLGAPNTLESFRQGLEQALLSADSMQRQVLEQWQEYVHALVRRLDLSEAAP
SS
NT seq 1449 nt   +upstreamnt  +downstreamnt
gtgacttcccttttttggtacgactacgaaaccactggcatcaatccgcgcaacgatcgc
ccgttgcaagtggccggtattcgcactgacctggcgctcaatgagattgatgaaccggtc
aacctctattgccagcttgccgacgacatcctgccgcatccagctgcctgcatgattacc
gggatcactgcgcagcgcctggccgagcgtggcttgggcgaagctgaattcatgacccgg
gtgcatgagcaactggcgcgcccgggaacctgcggtgtgggttacaacaccttgcgcttc
gatgacgagatgactcgctacagcctgtaccgcaatttcttcgatccctatgcccgggag
tggcaagggggcaacagtcgctgggacttgatcgacgtggtgcgtgcagcctatgcgttg
cgccccgagggtattgtctggccagaggagcaagggcaggtgaccctgaagcttgagcgc
ctgaccgcagccaatggcatcgatcacggccaggctcacgatgccttgtccgatgtgcgg
gcgactatcgccctggcccggctgattcgcgacaaacagcccaagctctacgattggttg
ttccagttgcgcagcaagcagcgtgtcatggaccagattcgcctgttgcaacctgtggtg
cacatttccgggcgtttctccgcggcgcggcattatgtcggtgtggtcctgccactggcc
tggcacccgcgcaatcgcaatgcgctgatcgtctgcgatctgcatctggatccccagggg
ctcctggacctggacgccgaggcgctgcgccaacggctgtacacccgacgtgaagagctg
gccgagggtgagttgcccgtaccgctgaagttgattcatatcaaccgctgtccggtggtc
gcgccgttgaatgtcctgcgggctgaagatcagcagcgtctgcacttggacatggatgag
taccagcgccgtgctgcgcttttgagggatgctcaagaagtttggcaagataaactttca
gtgatctacggccctgatgagttcgctgtcagcgaagaccctgagcagcaattgtacgac
ggctttattggtgatcgtgatcgacgcttgtgtgagcaagtgcgcttggcagatccacag
aatttagctcggcaacagtggccattcgatgatgagcgactgcctgaactactcttccgc
taccgtgctcgtaactttacggaaacattgagcgacgctgagcaagaacggtggctggga
ttttgccggcaacgcttgcttgatccgcaactgggcgcgcccaataccttggaaagtttc
cgtcaaggtcttgagcaggcgttgctaagtgctgattcgatgcagcgccaggtccttgag
cagtggcaggaatatgttcatgcgctggttcgacgcctggatcttagtgaagctgctcct
agttcttga

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