Pseudomonas sessilinigenes: C4K39_5311
Help
Entry
C4K39_5311 CDS
T07575
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psep
Pseudomonas sessilinigenes
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psep03400
]
C4K39_5311
DNA repair and recombination proteins [BR:
psep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C4K39_5311
Archaeal homologous recombinant proteins
C4K39_5311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Flavi_M
Motif
Other DBs
NCBI-ProteinID:
AZC26955
LinkDB
All DBs
Position
5739699..5740943
Genome browser
AA seq
414 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLRQLKHEQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVSAHEQQPGLSIVMIAGNHDSGSRIELPAPLMRRLHAHALGRVLWLDDGQLDT
ERLLLPLPDASGKVAAWCLALPFLRPAEVTGRHLGEDYLQGIAQVHEWLIAAAEERRQPG
QALIAVSHAHMAGGSVSEDSERSLVIGNAEALPASLFGPQISYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIDYKHQVLDIRLDGERLLSVEPRLIPRAVNLQRVGPAPLGEVLSQL
GTLPDIDLLAEEQRQPWLEVRVRLDEPQPDLRQQLESALQGKAVRLVRIAAEYAGQGAHD
TQDSGGQLIELDQLSPEELFRRAWRDAYANEADEQTLKDFALLLQDVQHEGEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcacctgggccagaacctccatggccaggagcgc
gacttcgaacacgcctgcttcctcgagtggctgctgcgccagctcaagcacgagcagccc
gacgcgctgctgatcgccggcgatatcttcgacaccgtcaacccgccggtcaaagcccag
gaacggctctacgacttcatcgtcagcgcccacgagcagcaaccgggcctgagcatcgtg
atgatcgccggcaaccacgattccggttcgcgtatcgaactgcctgcgccattgatgcgg
cgcctgcacgcccatgccctgggtcgggtgctgtggctcgatgacggccaactggatacc
gagcgcctgctgctgcccctgcccgatgccagcggcaaggtcgcggcctggtgcctggcc
ttgcccttcctgcgaccggcggaagtcaccggccgacacctgggcgaggactacctccag
ggcatcgcccaggtccatgagtggttgattgccgccgccgaggaacgccgccaaccgggc
caggccctgattgccgtaagccacgcgcacatggccggcggctcagtctccgaggactcc
gaacgcagcctggtgatcggcaacgccgaggccctgcccgccagcctgttcggcccgcag
atcagctacgtggccctggggcacctgcacaagccacagaaggtcaacggcgaggaacgc
atccgctacagcggctcgccgatcccgctgtcgttctccgagatcgactacaagcaccag
gtcctggacatccgcctggacggcgagcggttgctcagcgtcgagccgcggctgatcccc
cgggcggtcaacctgcaacgtgtcggtcccgcccccttgggcgaagtcctgagccaactc
ggcacgctgccggacatcgacctgctggccgaagaacaacgccagccctggctggaagtg
cgggtacgcctggacgaaccacaaccggacttgcgccagcaactggaaagcgccctgcaa
ggcaaggccgtgcgcctggtgaggatcgcggccgaatacgccggccagggtgcgcacgac
actcaagacagtggcggccagctgatcgaactggatcaactgagccccgaagaactgttc
cgccgggcctggcgcgacgcctacgccaatgaagcggatgaacagaccctcaaggatttc
gccctgctgttgcaggacgtccagcacgaaggtgagcagccatga
DBGET
integrated database retrieval system
