Pseudomonas sessilinigenes: C4K39_5924
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Entry
C4K39_5924 CDS
T07575
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
psep
Pseudomonas sessilinigenes
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psep03032
]
C4K39_5924
03036 Chromosome and associated proteins [BR:
psep03036
]
C4K39_5924
03400 DNA repair and recombination proteins [BR:
psep03400
]
C4K39_5924
DNA replication proteins [BR:
psep03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C4K39_5924
Chromosome and associated proteins [BR:
psep03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
C4K39_5924
DNA repair and recombination proteins [BR:
psep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
C4K39_5924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Barstar
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AZC27564
LinkDB
All DBs
Position
complement(6403688..6403960)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADLPKAAAGRALDAVIESVTGALKAGDSVVLVGFGTFSVTDRPARVG
RNPQTGKTLEIAAAKKPGFKAGKALKEAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgattgatgctatcgctgcatctgctgatctcccgaaagctgct
gctggccgtgcgctggatgcagtaatcgaatccgttactggcgctctgaaggccggtgac
tctgttgttctggttggttttggcactttctccgtaactgatcgtccagctcgtgtcggc
cgcaacccacagaccggcaagactctggaaatcgctgctgctaaaaagccaggtttcaaa
gctggtaaagcactgaaagaagccgttaactaa
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