Pseudonocardia sp. EC080610-09: AD006_00440
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Entry
AD006_00440 CDS
T04146
Name
(GenBank) transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
pseq
Pseudonocardia sp. EC080610-09
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pseq03000
]
AD006_00440
Transcription factors [BR:
pseq03000
]
Prokaryotic type
Helix-turn-helix
Other families
AD006_00440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_IclR
MarR_2
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
ALL74166
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Position
complement(97251..98108)
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AA seq
285 aa
AA seq
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MSVQRVTDELQRLGMSGCEAKAYVALVVAGEPVNGYEVAKRSGVPRSTVYETLGKLVGRG
AAYEVRSDEDGVGYVPLPPDSLLERMRRDFDRTLGVLEDEMPRLTSPPRVRLAHSLSERE
TLLDRAEDVVVAARTELWVSGWPEDLERLKPSVRRSEERGAAVATVVFGRDHDPVGWTTE
HRYSPPDTVEAVLGRRMLVVVADREQAVIGGIAGDQTWGMYTDDPATVLLAAGYVRFDIA
MHLVAERFAGDGFEEFWAGDPAIRRLREVPPPVDEGGDDRGEWTG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgcagcgggtgaccgatgaactgcaacgcctcggcatgtccgggtgcgaggcc
aaggcctacgtggcgctcgtcgtcgcgggggagccggtcaacgggtacgaggtggcgaag
cggtcgggcgtcccgcgcagcaccgtctacgagacgctgggcaagctcgtcggccggggt
gcggcctacgaggtccggtccgacgaggacggtgtcggctacgtgccgctgccgcccgac
tcgctgctcgagcggatgcgccgggacttcgaccgtacgctcggggtcctcgaggacgag
atgccgaggctgacgtcgccgccccgggtgcggctggcgcactcgctgtccgagcgcgag
accctgctcgaccgcgccgaggacgtcgtcgtcgcggcccgcacggagctgtgggtctcg
ggctggccggaggacctcgagcggctcaagccctccgtccgcaggtccgaggaacgaggc
gcggcggtcgcgaccgtcgtgttcggacgcgaccacgacccggtcggctggacgaccgag
caccgttactcgccaccggacaccgtcgaggccgtcctcggccggcgcatgctcgtcgtc
gtggccgaccgcgagcaggccgtcatcggcggtatcgcgggtgaccagacctggggcatg
tacaccgacgacccggcgaccgtgctgctcgcggccgggtacgtgcgtttcgacatcgcg
atgcacctcgtcgccgagcgcttcgccggcgacgggttcgaggagttctgggccggcgac
cccgcgatacggcggctccgggaggtgccgcccccggtcgacgagggcggcgacgaccgc
ggcgagtggaccggatga
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