Pseudonocardia sp. EC080610-09: AD006_00480
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Entry
AD006_00480 CDS
T04146
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseq03400
]
AD006_00480
Enzymes [BR:
pseq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
AD006_00480
DNA repair and recombination proteins [BR:
pseq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
AD006_00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ALL74173
LinkDB
All DBs
Position
complement(104667..106157)
Genome browser
AA seq
496 aa
AA seq
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MASRDRLPLWLFADQLGPHVWDTDEFADREIVLVESSRALGRKPYHRQKLHLVLSGMRHL
ADALGDRATYLRTGTYREALETVGRPVVVHQPTSFPASDMVRRFRKEGLVAEVRPTPTFA
LPQDEFDDWAGDRETFRMEDFYRSQRERFDVLMEGTEPVGGKWNYDHDNRESPPKGAGTL
GVEPPWQPSEDEIDEQVRADLDAAGLPTVGEDGPRRFAVTHDEAVRALRHFVDHRLDTFG
PYEDAILARDWAMAHSLLSVPLNLGALHPLEAVRAAEQAYHDGTARLESVEGFVRQVLGW
REFVWQLYWRFGRGYTRSNHLRARTPLPDWWAGLDAGAVTASCLSSALSDVRDRGWTHHI
PRLMILGNHAMQRGYRPDEVNDWFATAFVDGFAWVMPPNVIGMSQHADGGRMTTKPYASG
GAYIDRMTDFCKACAFDPKIRVGEKACPFTAGYWQFVHRHRELHASNHRTKRAVATMDRL
TDLDALLEQESAREEF
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccgggaccgtctgccgctctggctcttcgccgaccagctcggcccgcacgtg
tgggacaccgacgagttcgcggaccgcgagatcgtgctcgtcgagtcgtcgcgggcgctc
ggccgcaagccctaccaccggcagaagctgcacctggtgctgtccgggatgcggcacctc
gccgacgcactcggcgaccgggccacctacctgcggaccggcacctaccgggaggcgctg
gagacggtgggccggccggtcgtggtgcaccagccgacgtcgttcccggcgtcggacatg
gtgcgccgcttccggaaggagggcctcgtcgcggaggtgcggccgacgccgaccttcgcg
ctgccgcaggacgagttcgacgactgggccggcgaccgcgagacgttccggatggaggac
ttctaccgctcccagcgggaacgcttcgacgtgctgatggagggcaccgagcccgtcggc
gggaagtggaactacgaccacgacaaccgcgagtccccgcccaagggcgccgggacgctc
ggtgtcgagccgccgtggcagccgtccgaggacgagatcgacgagcaggtccgcgccgac
ctcgacgccgcaggcctgccgacggtcggggaggacggcccgcgccgcttcgcggtcacg
cacgacgaggccgtccgcgccctgcggcacttcgtggaccaccggctcgacacgttcggc
ccgtacgaggacgccatcctggcccgggactgggccatggcgcactcgttgctgtcggtc
ccgctgaacctcggtgcgctgcacccgctggaggccgtccgcgcggccgagcaggcgtac
cacgacgggacggcccggctggagagcgtcgagggcttcgtccggcaggtgctcggctgg
cgcgagttcgtgtggcagctctactggcggttcggccgcggctacacccgcagcaaccac
ctgcgggcccgcaccccgctgccggactggtgggccgggctcgacgccggcgccgtcacc
gcgtcgtgcctgtcctcggcgctgtccgacgtccgggaccgcggctggacccaccacatc
ccccggctgatgatcctcggcaaccacgcgatgcagcgcggctaccgcccggacgaggtc
aacgactggttcgcgacggcgttcgtcgacgggttcgcgtgggtcatgccgccgaacgtg
atcggtatgagccagcacgccgacggcggccggatgacgaccaagccgtacgcctccggt
ggcgcctacatcgaccgcatgaccgacttctgcaaggcctgcgcgttcgacccgaagatc
cgcgtgggggagaaggcgtgccccttcaccgccgggtactggcagttcgtgcaccggcac
cgcgagctgcacgcgtcgaaccaccggacgaagcgggcggtcgcgacgatggaccggctg
acggacctggacgcgctgctggagcaggagtcggcccgcgaggagttctga
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