Pseudonocardia sp. EC080610-09: AD006_01465
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Entry
AD006_01465 CDS
T04146
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Pathway
pseq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AD006_01465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pseq03000
]
AD006_01465
03400 DNA repair and recombination proteins [BR:
pseq03400
]
AD006_01465
Enzymes [BR:
pseq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AD006_01465
Transcription factors [BR:
pseq03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AD006_01465
DNA repair and recombination proteins [BR:
pseq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AD006_01465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
ALL78256
LinkDB
All DBs
Position
305204..306688
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AA seq
494 aa
AA seq
DB search
MLLDHDTCYRAVAAKDQRFDGQFVTAVRTTGIYCRPSCPVPPPKARNVEFLRTAAAAQSA
GYRACRRCLPDAVPGSPEWNLRADAAGRAMRLIADGVVEREGVPGLASRLGYSPRQLGRI
LTAELGAGPLALARAQRAHTARVLVETTPLGLADVAFAAGFGSVRQFNDTVRGVYGVPPS
RLRSEAARRRGAAHAAPGTITLRLPYRAPFDPHGLLDHLAARAVDRVERVDGGTYRRTLR
LPHGPASVALDLTARPGAVLATLRTTDPRDVGPAVSRLRRLLDLDADPLAVDTALAADPV
LAPLVAATPGIRLAGTADPAETAVRTVLGQQVSVAAARTAASRIAASHGTELPPALRDDD
GPDLLFPAPETLADVELAGPARRAASLRGLCSALASGELVLDAGREPDALRAELRTLPGI
GPWSAGYLAMRVLGDPDELLASDLAVRRGAAALGLPGEEDALTGRARAWAPWRSYAATHL
WRAATSAPAVRRNA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
gtgctgctcgaccacgacacctgttaccgcgccgtcgccgcgaaggaccagcggttcgac
ggccagttcgtcacggcggtgcgcacgaccggcatctactgcaggccgtcctgcccggtg
ccgccaccgaaggcacgcaacgtcgagttcctgcgcacggcggcggccgcccagtcggcc
ggctaccgggcgtgccggcggtgcctgcccgatgccgtcccggggtccccggagtggaac
ctgcgggcggacgccgccgggcgggcgatgcggctgatcgccgacggcgtcgtcgaacgg
gagggggtgcccgggctcgcgtcgcgactcgggtactcgccccggcagctcggccggatc
ctcaccgccgagctcggcgccgggccgctcgcgctggcccgcgcgcagcgcgcgcacacc
gcccgcgtcctggtggagacgacgccgctcggcctggccgacgtcgcgttcgccgccggg
ttcggcagcgtgcgccagttcaacgacaccgtccgcggcgtctacggcgtaccgccgtca
cggctccggagcgaggccgcgcggcggcggggtgcggcgcacgcggcaccggggacgatc
acgctccggctgccgtaccgggccccgttcgacccgcacgggttgctcgatcacctggcc
gcccgcgccgtcgaccgggtcgaacgcgtcgacggcggcacctaccggcggacgctgcgc
ctgccgcacggcccggcgtcggtcgcgctcgacctgaccgcccggcccggcgccgtgctg
gcgacgctgcgcacgaccgacccgcgcgacgtcggcccggcggtgtcccggctgcgccgg
ctgctcgatctcgacgccgacccgctcgccgtcgacaccgcgctggccgccgacccggtc
ctcgccccgctcgtcgcggcgacgccggggatccggctggcgggcaccgccgatccggcc
gagacggccgtccgcaccgtgctcggccagcaggtctcggtcgccgcggcacggaccgcg
gcgtcccggatcgcggcgtcgcacgggacggagctgccacccgccctgcgcgacgacgac
ggccccgacctgctcttccccgccccggagacgctcgccgacgtcgagctcgccggtccg
gcgcggcgcgccgcctcgctgcgcgggctgtgctccgcgctcgcgtcgggagagctcgtg
ctcgacgccggacgcgaacccgacgcgctgcgcgccgagctgcggacgctgcccgggatc
gggccgtggagcgccggctacctcgcgatgcgggtgctcggcgatcccgacgaactgctg
gcgtcggacctcgcggtgcgccgcggggccgcggcgctcggcctgcccggcgaggaggac
gcgctcaccgggcgcgcccgcgcctgggcgccctggcggtcctacgccgccacccatctc
tggcgggcggccacgtccgcccccgccgtcaggaggaacgcatga
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