Pseudonocardia sp. EC080610-09: AD006_02635
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Entry
AD006_02635 CDS
T04146
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Pathway
pseq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AD006_02635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pseq03019
]
AD006_02635
03110 Chaperones and folding catalysts [BR:
pseq03110
]
AD006_02635
03029 Mitochondrial biogenesis [BR:
pseq03029
]
AD006_02635
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pseq04147
]
AD006_02635
Enzymes [BR:
pseq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AD006_02635
Messenger RNA biogenesis [BR:
pseq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AD006_02635
Chaperones and folding catalysts [BR:
pseq03110
]
Heat shock proteins
HSP60 / Chaperonin
AD006_02635
Mitochondrial biogenesis [BR:
pseq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AD006_02635
Exosome [BR:
pseq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AD006_02635
Exosomal proteins of other body fluids (saliva and urine)
AD006_02635
Exosomal proteins of breast cancer cells
AD006_02635
Exosomal proteins of colorectal cancer cells
AD006_02635
Exosomal proteins of bladder cancer cells
AD006_02635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ALL74496
LinkDB
All DBs
Position
complement(534607..536295)
Genome browser
AA seq
562 aa
AA seq
DB search
MAKELRFGAEGRHLLQAGVDQLAEAVKSTLGPKGRNVILEKITGSPEVTNDGVTIAREIH
LRDPFENMGAQLLKEAAVKTNDTVGDGTTTATVIAQAMVREGMGAIERGGNPVLVKRGID
LAVGALVERLQAVSHPVSSEEEYARVAAISANDDWSIGNVVARALHTVGDDGVVTVDDAP
IPGVTVSFVEDFEFDNGYVSPYMVTNPGTLEAIVDDPYILFSAEKIKDVQQIMPVLDRIM
RNERRPLVVVAETVEGTALQMLVHNHVNGHFQAVAIKAPGFGEKRIHLLEDMASLCGGKV
HSKSSSFSLEQIDIEHLGRASQVRVTSESTTFIGGKGDRGALENRLAQLRAELARATIGT
DEDFFSDRIARLSGKAAIISVGAPTNAETREIRHRVDDSLQATRAAVAEGIVAGGGAALL
HAEPALDALDVTGDYRLGVEIVRHALSEPVHLIASNAGYDGDDVVKQVTAMASDDGFDAL
EGRFGNMVELGIIDPLRVVRSALQNGASVAGLILTTNSLVAEEQTPWNKALMTEFGQLDE
GIPQPDPDSSTPQSMGLGPSVG
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggaactccgcttcggtgccgagggccggcacctgctgcaggccggcgtcgac
cagctcgccgaagccgtcaagagcacgctcggtcccaagggacgcaacgtcatcctggag
aagatcacgggctcgcccgaggtcacgaacgacggcgtgaccatcgcccgcgagatccac
ctgcgcgacccgttcgagaacatgggcgcccagctgctcaaggaagcggcggtgaagacc
aacgacaccgtcggcgacggcacgacgaccgcgaccgtcatcgcgcaggccatggtccgc
gagggcatgggcgcgatcgagcgcggcggcaaccccgtcctggtcaagcggggcatcgac
ctcgccgtcggggcactggtggagcggctgcaggccgtctcgcacccggtgagctccgag
gaggagtacgcccgcgtcgccgccatctccgccaacgacgactggtcgatcggcaacgtc
gtcgcgcgggcgctccacaccgtcggcgacgacggcgtggtgaccgtcgacgacgccccg
atcccgggcgtcacggtctcgttcgtcgaggacttcgagttcgacaacgggtacgtgtcg
ccctacatggtgaccaaccccggcaccctcgaggcgatcgtcgacgacccctacatcctc
ttctccgcggagaagatcaaggacgtccagcagatcatgccggtgctggaccggatcatg
cgcaacgagcgccggccgctggtcgtcgtcgccgagaccgtcgagggcaccgcactccag
atgctggtgcacaaccacgtcaacgggcacttccaggccgtcgcgatcaaggcgcccggg
ttcggggagaagcgcatccacctgctcgaggacatggcctcgctgtgcgggggcaaggtg
cactccaagagctcgtcgttctcgctggagcagatcgacatcgagcacctcggccgcgcc
tcgcaggttcgggtgaccagtgagagcaccaccttcatcggcgggaagggcgaccggggc
gcgctggagaaccggctggcccagctccgtgccgagctcgccagggccaccatcggcacc
gacgaggacttcttctccgaccggatcgcccggctctccggcaaggccgccatcatctcg
gtgggcgctccgacgaacgccgagacccgcgagatccggcaccgtgtcgacgactcgctg
caggccacccgggccgcggtcgccgagggcatcgtcgcgggcggcggtgcggcactgctg
cacgccgagccggcgctcgacgccctcgacgtcaccggggactaccggctcggcgtcgag
atcgtccggcacgcgctgtccgagccggtgcacctcatcgcgtccaacgccggctacgac
ggcgacgacgtcgtcaagcaggtcaccgcgatggcctccgacgacgggttcgacgcgctg
gagggccgcttcgggaacatggtcgagctggggatcatcgacccgctccgggtggtccgc
tccgccctgcagaacggggcgtcggtggccggcctgatcctcaccaccaactcgctggtg
gccgaggagcagacgccgtggaacaaggcgctcatgacggagttcggccagctggacgag
ggcatcccgcagcccgacccggactcgagcacaccgcagtcgatgggcctcggaccgtcg
gtgggctga
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