Pseudonocardia sp. EC080610-09: AD006_02685
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Entry
AD006_02685 CDS
T04146
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseq03400
]
AD006_02685
Enzymes [BR:
pseq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AD006_02685
DNA repair and recombination proteins [BR:
pseq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AD006_02685
Prokaryotic type
AD006_02685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ALL74504
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All DBs
Position
complement(548271..549665)
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AA seq
464 aa
AA seq
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MASSTAVVWFRRDLRVADQPTFLAAADAADRALALFVLDPALLDPSGAARRNFLYGCLRE
LDSALGGRLLVVKGDPVDVVPRVATAVGADTVHVAADYGPYGRERDEQVEKALTDAGAEL
VRTGSPYAVAPGRVTKGDGDPFKVFTPFSRAWAEHGWRAPAETSASTCTWTDPSGKDGGP
RAVQVPADEPCDSALPDAGETAAAARWADFLDEGVAEYESQRDMPAKKGTSGMSPYLKYG
CVHPRTLLADLGSRRGDSVKAYRTEIAWREFYADVLYRRPDSARRNYDTGFDHLPLRTDE
AAYDDLERWKDGRTGFPIVDAGMRQLRAEAWMHNRVRMVVASFLVKDLHLPWWWGARHFM
QLLVDGDLASNQHGWQWTAGSGTDAAPYFRIFNPITQGERFDPDGDYVRRWVPELADVPG
KAVHQPWKLKDGLPDGYPERMVEHKAEREEALARYEAVKAAKRS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagcactgccgtcgtgtggttccgccgcgatctccgggtcgccgaccagccg
accttcctggccgccgcggacgccgccgaccgggcactcgcgctgttcgtgctggacccg
gcgctcctcgacccgtcgggcgcggcccgccggaacttcctgtacggctgcctgcgggag
ctcgactccgcgctcggcggacggctgctggtggtgaagggcgacccggtcgacgtcgtc
ccgcgggtggcgacggccgtcggtgcggacaccgtgcacgtcgccgccgactacggcccg
tacggccgggagcgcgacgagcaggtcgagaaggccctcaccgacgccggcgccgagctc
gtccgcaccgggtccccctacgccgtcgcgccgggccgggtgaccaagggcgacggcgac
ccgttcaaggtgttcaccccgttcagccgggcctgggccgagcacggctggcgagccccc
gccgagacgtccgcgtcgacctgcacctggacggacccgtccggcaaggacggcgggcca
cgcgcggtgcaggtccccgccgacgagccctgcgactccgcgctgcccgacgcgggggag
accgcggcggcggcgcggtgggcggacttcctcgacgagggcgtcgcggagtacgagtcg
cagcgcgacatgccggcgaagaagggcacgtcggggatgtcgccgtacctcaagtacggc
tgcgtgcacccgcgcacgctgctcgccgacctcgggtcgcgccggggcgactcggtcaag
gcctaccgcaccgagatcgcctggcgggagttctacgccgacgtgctgtaccggcgtccg
gactccgcgcggcgcaactacgacaccggtttcgaccacctcccgctgcgcaccgacgag
gcggcctacgacgacctcgaacgctggaaggacgggcgcaccggcttcccgatcgtcgac
gccgggatgcgccagctccgtgccgaggcgtggatgcacaaccgggtgcggatggtcgtc
gcgtcgttcctggtcaaggacctgcacctgccgtggtggtggggcgcgcggcacttcatg
cagctcctggtcgacggcgacctcgcctccaaccagcacggctggcagtggacggccggg
tcgggcaccgacgcggcgccgtatttccggatcttcaacccgatcacccagggggagcgg
ttcgatcccgacggcgactacgtgcgccggtgggtcccggagctcgccgacgtgccgggc
aaggccgtgcaccagccctggaagctgaaggacggcctcccggacggctatcccgagcgg
atggtcgagcacaaggcggagcgcgaggaggcactggcccgctacgaagcagtgaaggcg
gcgaagcgctcgtga
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