Pseudonocardia sp. EC080610-09: AD006_09550
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Entry
AD006_09550 CDS
T04146
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pseq03016
]
AD006_09550
Enzymes [BR:
pseq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AD006_09550
Transfer RNA biogenesis [BR:
pseq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AD006_09550
Prokaryotic type
AD006_09550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ALL75494
LinkDB
All DBs
Position
1986392..1987198
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AA seq
268 aa
AA seq
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MRLDIAYDGTDFSGWAIQPTRRTVQGVLTDALSTVLRTPLRLTVAGRTDAGVHASGQVAH
VDVPAELDPQLDGLLRRLNRFLPPDVRVRATTRVPETFDARFSALRRHYRYRVTTASFGA
EPLRARETVAWPHPLDPALMNAASALMVGEHDFAAFCKRREGATTVRALQRFEWDPAPGE
PGVLVASVSADAFCHSMVRSLVGAVFEVGRGHRPPEWPAELLARTSRASEVTVAPPHGLS
LTGVDYPADDELAARAEQTRRIRVPGAS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctcgacatcgcgtacgacggcaccgacttctccggctgggcgatccagccgacc
cgccgcaccgtccagggcgtgctcaccgacgcgctgtcgaccgtgctgcgcaccccgctg
cggctcaccgtcgccggccggaccgacgcgggggtccacgcgtccgggcaggtcgcgcac
gtcgacgtccccgcggagctcgatccgcagctggacgggctgctccgacggctcaaccgg
ttcctgccgcccgacgtccgggtccgggcgacgacccgggtcccggagaccttcgacgcc
cggttctccgcgctccgcaggcactaccgctaccgggtcaccaccgcgtcgttcggggcc
gagccgctgcgcgcccgcgagacggtggcctggccccatccgctcgacccggcgctcatg
aacgccgcgtccgcgctgatggtgggcgagcacgacttcgccgcgttctgcaaacgccgg
gagggcgccaccacggtgcgggcgctgcaacgcttcgagtgggacccggcgccgggggag
cccggtgtgctggtcgcgtcggtgtcggccgacgcgttctgccactcgatggtccgcagc
ctggtcggcgcggtgttcgaggtgggccgtgggcaccggcccccggagtggcccgccgag
ctgctggcgcggacgtcgcgggcgtcggaggtgacggtcgcgccgccgcacgggttgtcg
ctgaccggcgtcgactaccccgccgacgacgagctggccgcccgggccgagcagacccgg
cggatccgggtccccggcgcctcctga
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