Pseudonocardia sp. EC080610-09: AD006_09830
Help
Entry
AD006_09830 CDS
T04146
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Pathway
pseq03420
Nucleotide excision repair
pseq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AD006_09830
03430 Mismatch repair
AD006_09830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseq03400
]
AD006_09830
Enzymes [BR:
pseq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AD006_09830
DNA repair and recombination proteins [BR:
pseq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AD006_09830
MMR (mismatch excision repair)
Other MMR factors
AD006_09830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALL78550
LinkDB
All DBs
Position
2046180..2048657
Genome browser
AA seq
825 aa
AA seq
DB search
MSALFELPGTSSVTEPTTSRGRQLLEGLNDRQREAVTHAGSPLLIVAGAGSGKTRVLTHR
IGWLLAERGVHPGEIMSITFTNKAAAEMKERVDGLVGRRSGPMWVSTFHSMCVRILRREA
KHLGVRSAFSVYDADDSRRLVGIVGRDLELDPKKFAPRALAAQISNLKNELLSPDDAAER
AGTDHERRIAEVYGVYQSRLRQANAFDFDDLIMETVSLLDRMPAVAEYYRRRFRHVLVDE
YQDTNHAQYELVRQLVLPATEKGKPAELCVVGDSDQSIYAFRGANIRNIIEFEQDFPDAR
TILLEQNYRSSQTILSAANAVIARNPERRDKRLWSDAGDGERVVGYVADNEHDEASFVAR
EIDRLVDSGEYRNSDIAVFYRTNNQSRVFEDVFLRVGMPYKVVGGVRFYERREIRDALAY
LRVLSNPEDTVSLRRILNVPKRGIGDRAESVVAEYAERERTSFSRALRTAAEEPAKLPAL
ATRSQKNIAGFVRMLDGLGELVDRGDDTAEILEAVYARTGYVEELQASEDPQDGTRMDNL
AELVTVAREFAGDAAVADLEALSTDPDAGGGAIGSGAAPGEDPAPAAGAPASPGDDVDTD
AGAPEPGSLAAFLERVALVADADSIPDDDTGVVTLMTLHTAKGLEFPVVFLTGWEDGIFP
HLRTLGDPKELAEERRLAYVGITRAEQRLYVSRAIVRSAFGQPSTNPASRFLDEVPAELT
EWRRTEEQLVAERPSAPVGRFGFGRSGGRGATGSGGRGDWKVPERSLNNTSLHLDVGDRV
NHDKYGLGTVIAADGVGPRATVTIDFGSGGTVRLMLIGGVPMQKL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgctgttcgaactccccgggacgagctcggtcaccgagccgacgacctcacgc
ggccggcagctgctcgagggcctcaacgaccggcagcgggaggccgtgacccacgccggg
tccccgctgctcatcgtcgcgggagcaggctcggggaagacgcgcgtgctcacgcaccgg
atcggctggctgctcgccgagcgcggggtgcaccccggcgagatcatgtcgatcaccttc
acgaacaaggccgcggccgagatgaaggagcgggtcgacggcctcgtgggtcgccgctcc
ggcccgatgtgggtctcgacgttccactccatgtgcgtgcggatcctgcgccgcgaggcc
aagcacctgggcgtgcgcagcgcgttctcggtctacgacgccgacgactcccgccgcctg
gtcggcatcgtgggccgggacctggagctcgacccgaagaagttcgccccgcgggccctc
gccgcacagatctcgaacctgaagaacgagctgctgtcgccggacgacgcggccgagcgt
gccggcaccgaccacgagcggcggatcgccgaggtctacggtgtctaccagtcccggctg
cggcaggcgaacgcgttcgacttcgacgacctgatcatggagacggtctcgctgctggac
cggatgcccgcggtggccgagtactaccggcgtcggttccggcacgtgctggtcgacgag
taccaggacaccaatcacgcccagtacgagctggtccgccagctggtgctcccggccacg
gagaaggggaagcccgccgagctctgcgtggtcggcgactcggaccagtcgatctacgcg
ttccgcggcgcgaacatccgcaacatcatcgagttcgagcaggacttcccggacgcgcgg
acgatcctgctggagcagaactaccgctcctcgcagacgatcctgtccgccgcgaacgcg
gtgatcgcccgcaacccggagcgccgggacaagcgactgtggtccgacgcgggcgacggg
gaacgcgtcgtcggctacgtcgccgacaacgagcacgacgaggcgtcgttcgtggcgagg
gagatcgaccggctcgtcgactccggcgagtaccgcaacagcgacatcgccgtcttctac
cgcacgaacaaccagtcccgtgtcttcgaggacgtgttcctgcgggtcgggatgccgtac
aaggtggtcggcggcgtccgcttctacgagcgccgcgagatccgcgacgcgctcgcgtac
ctgcgggtgctgtccaacccggaggacacggtcagcctgcggcgcatcctcaacgtgccc
aagcgcggcatcggggaccgggccgagtcggtcgtcgcggagtacgcggagcgggagcgg
acgtcgttctcccgggcgttgcgcaccgcggccgaggagcccgcgaagctcccggccctg
gcgacgcgctcgcagaagaacatcgccgggttcgtccgcatgctcgacggtctcggcgaa
ctggtggaccgcggcgacgacaccgcggagatcctggaggcggtctacgcccgcaccggg
tacgtggaggagctgcaggcctccgaggacccgcaggacggcacccggatggacaacctc
gccgagctggtcaccgtggcccgcgagttcgccggtgacgccgcggtggccgacctggag
gcgctgagcaccgacccggacgccggtggcggggcgatcgggtccggagcggcccccggc
gaggacccggctcccgctgcgggggcaccggcgagccccggcgacgacgtcgacaccgac
gccggcgcccccgagcccggttcgctggccgcgttcctggagcgggtggccctggtcgcc
gacgccgactccatccccgacgacgacaccggcgtcgtcaccctgatgaccctgcacacc
gcgaagggcctggagttcccggtcgtgttcctgaccggctgggaggacgggatcttcccg
cacctgcggacgctgggggacccgaaggagctcgccgaggagcgccggctcgcctacgtg
gggatcacccgggccgagcagcgcctctacgtgtcccgcgcgatcgtccggtcggcgttc
gggcagcccagcaccaacccggcgtcccggttcctcgacgaggtgccggccgagctgacc
gagtggcggcgcaccgaggagcagctggtggccgagcggccgtccgccccggtgggccgg
ttcggcttcggccgctccggcgggcggggcgcgacggggtcgggcggccgcggggactgg
aaggtccccgagcgcagcctgaacaacacctcgctgcatctcgacgtcggcgaccgcgtc
aaccacgacaagtacgggctgggcacggtgatcgccgcggacggcgtcggcccgcgggcg
acggtgacgatcgacttcggctcgggcgggacggtccgcctgatgctgatcggcggcgtc
ccgatgcagaagctgtag
DBGET
integrated database retrieval system
