Pseudonocardia sp. EC080610-09: AD006_11285
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Entry
AD006_11285 CDS
T04146
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Pathway
pseq00300
Lysine biosynthesis
pseq00470
D-Amino acid metabolism
pseq01100
Metabolic pathways
pseq01110
Biosynthesis of secondary metabolites
pseq01120
Microbial metabolism in diverse environments
pseq01230
Biosynthesis of amino acids
Module
pseq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AD006_11285
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AD006_11285
Enzymes [BR:
pseq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AD006_11285
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ALL75742
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All DBs
Position
2372284..2373615
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AA seq
443 aa
AA seq
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MTLAELVPSLRTTLNARLEPGIWPSTSRTTSAGDLRIGGVDVHELANRFGTPLQVLDSAD
IRSRCRAYHDALPGAEIIYAGKAFLCRGTARLVAQEGCSIDACSGGEVAVAAAAGVPGER
ILLHGTVKTDEDLKAAFAARVGRIVIDSVGEIDRIAAAAPRRQKVLLRVRPDIDARTHPG
LTTATADSWFGIAAGEVLAAVGRILARPRLRLIGLHCHLGSQVCSISRYEAAATRMVEVL
AAVRARYGLELPQLDLGGGHAVGYAEGERSTDPVSFGRAVRRAVSGACTAHGIVEPQLLV
EPGRAIVARAGVTLYRVAAVERSGGRSTVLVDGGMSDNPRPALYGARYPVRLVGRATTAD
LEPMRVAGRHCESTDVLADAVRLPADLTAGDVLAMPVSGAYQASMASTYNQIPRVPVVAV
SGGATLPLLRRDTPEDLLRRDIG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
gtgactctcgccgaactggtcccgtcgctgcgcaccacgctcaacgcccgcctcgagccg
gggatctggccgtccacgtcccggaccacctccgccggggacctccgtatcggcggcgtc
gacgtccacgagctcgccaaccgcttcggcaccccgctgcaggtcctcgacagcgccgac
atccggtcgcgctgccgtgcctaccatgacgcgctccccggcgcggagatcatctacgcc
gggaaggcgttcctctgccgcggcaccgcgcgcctggtggcccaggagggatgctcgatc
gacgcctgctccggcggcgaggtcgccgtcgcggccgccgccggggtccctggtgagcgc
atcctgctgcacggcaccgtcaagaccgacgaggacctcaaggccgcgttcgccgcccgg
gtcgggcgcatcgtcatcgactccgtcggtgagatcgaccgcatcgccgctgcggcgcca
cgccgccagaaggtgctgctgcgggtacgtcccgacatcgacgcccgcacccacccgggc
ctgacgaccgccaccgcggactcctggttcggcattgccgccggggaggtcctcgccgcg
gtcggccggatcctggcgcgtccgcggctgcgcctgatcggcctgcactgccatctcggc
tcccaggtctgctccatcagccgctacgaggccgccgcgacccggatggtcgaggtcctc
gccgccgtccgggcccgctacggcctcgaactgccccagctcgacctcggtggcggtcac
gccgtcggctacgccgagggtgagcggtccaccgacccggtgtcgttcggccgcgcggtg
cgccgggccgtctccggtgcgtgcactgcccacggcatcgtcgagccgcagctgctggtc
gaacccggccgggcgatcgtcgcgcgcgccggtgtgacgctctaccgggtcgccgccgtc
gagcgcagcggcggtcgcagcaccgtgctggtggacggtggcatgagcgacaacccccgc
ccggccctctacggtgcccgctaccccgtgcggctcgtgggacgcgccaccacggccgac
ctcgagccgatgcgggtggccgggcggcactgcgagtccaccgacgtcctcgccgacgcc
gtgcggctccccgcggacctcacggccggtgacgtgctggcgatgccggtctccggggcc
taccaggcgtcgatggcctcgacctacaaccagatcccccgcgtcccggtggtcgccgtc
agtggcggtgcgacgctgccgttactgcgccgcgacacccccgaggacctcctgcgtcgc
gacatcggatga
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